LINC01135 Gene

Name long intergenic non-protein coding RNA 1135
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC01135 is a long non‐coding RNA that has recently been identified as part of an m5C‐related regulatory network in prostate cancer. In one study, a prognostic signature based on m5C‐associated lncRNAs was developed using rigorous statistical methods (including univariate Cox and LASSO regression), and LINC01135 was among the 17 lncRNAs incorporated into this model (1). Although the detailed molecular functions of LINC01135 remain to be fully elucidated, its inclusion in this signature suggests that it may contribute to the regulation of gene expression through m5C methylation processes, thereby potentially influencing tumor progression and patient outcomes in prostate cancer.\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Further research is needed to define the specific mechanistic roles of LINC01135 in RNA modification and its impact on the tumor microenvironment. This could eventually aid in refining prognostic models and therapeutic strategies targeting the m5C modification machinery.\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Citation:."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Ke Wang, Weibo Zhong, Zining Long, et al. "}, {"type": "b", "children": [{"type": "t", "text": "5-Methylcytosine RNA Methyltransferases-Related Long Non-coding RNA to Develop and Validate Biochemical Recurrence Signature in Prostate Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Mol Biosci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fmolb.2021.775304"}], "href": "https://doi.org/10.3389/fmolb.2021.775304"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34926580"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34926580"}]}]}]}
NCBI Gene ID 100131060
API
Download Associations
Predicted Functions View LINC01135's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC01135's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC01135's ARCHS4 Predicted Functions.

Functional Associations

LINC01135 has 228 functional associations with biological entities spanning 2 categories (disease, phenotype or trait, cell line, cell type or tissue) extracted from 4 datasets.

Click the + buttons to view associations for LINC01135 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of LINC01135 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC01135 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GWAS Catalog SNP-Phenotype Associations phenotypes associated with LINC01135 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC01135 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.