LINC01139 Gene

Name long intergenic non-protein coding RNA 1139
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC01139 has been implicated as an oncogenic long non‐coding RNA in multiple tumor types. In hepatocellular carcinoma (HCC), LINC01139 is markedly overexpressed and its elevated levels correlate with advanced TNM stage, lymph node metastasis, and poor patient prognosis. Functional studies demonstrate that silencing LINC01139 suppresses cell proliferation, colony formation, and metastasis. Mechanistically, LINC01139 acts as a molecular sponge for miR‑30, leading to the upregulation of the transcription factor MYBL2, thereby promoting oncogenic pathways in HCC."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In ovarian carcinoma, LINC01139 emerges as one of a panel of lncRNAs that are significantly associated with pathological grade and recurrence risk. Bioinformatics and clinical analyses have identified LINC01139 as an independent prognostic factor, with its dysregulated expression contributing to the mechanisms underlying ovarian cancer progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Zai-Bo Li, Hong-Tao Chu, Min Jia, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC01139 promotes the progression of hepatocellular carcinoma by upregulating MYBL2 via competitively binding to miR-30 family."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2020.02.116"}], "href": "https://doi.org/10.1016/j.bbrc.2020.02.116"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32115147"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32115147"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Ying Chen, Fangfang Bi, Yuanyuan An, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of pathological grade and prognosis-associated lncRNA for ovarian cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.28704"}], "href": "https://doi.org/10.1002/jcb.28704"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31034644"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31034644"}]}]}]}
Synonyms LINKA, LINK-A
NCBI Gene ID 339535
API
Download Associations
Predicted Functions View LINC01139's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC01139's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC01139's ARCHS4 Predicted Functions.

Functional Associations

LINC01139 has 152 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.

Click the + buttons to view associations for LINC01139 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC01139 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC01139 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of LINC01139 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
HuBMAP Azimuth Cell Type Annotations cell types associated with LINC01139 gene from the HuBMAP Azimuth Cell Type Annotations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC01139 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.