| Name | long intergenic non-protein coding RNA 1140 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC01140 is a long intergenic non‐coding RNA that has emerged as a multifunctional regulator in both cancer and inflammatory disorders. In muscle‐invasive bladder cancer, LINC01140 is upregulated and promotes cell viability, migration, invasion, and macrophage M2 polarization via a competing endogenous RNA (ceRNA) network involving miR‑140‑5p and FGF9."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In sarcoma, however, lower LINC01140 expression is observed in metastatic tumors, with reduced levels correlating with a poorer prognosis; mechanistic analyses suggest its involvement in pathways such as the epithelial–mesenchymal transition and modulation of immune responses."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In non–small cell lung cancer, LINC01140 acts as a tumor suppressor by sponging miR‑4742‑5p to favor TACC1 expression, thereby reducing invasion, diminishing cisplatin resistance, and triggering apoptosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " In breast cancer, circulating LINC01140 is found to be downregulated, and higher expression in tumors is associated with earlier disease stages and longer relapse‐free survival, indicating its potential as a diagnostic biomarker."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Beyond cancer cell–intrinsic effects, LINC01140 participates in the regulation of inflammatory responses. In macrophages stimulated by oxidized low‐density lipoprotein, LINC01140 exerts an anti‐inflammatory role by negatively regulating miR‑23b and subsequently promoting A20 expression to suppress NF‑κB activity."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " Similarly, in lung fibroblasts from patients with idiopathic pulmonary fibrosis (IPF), LINC01140 is upregulated and supports cellular proliferation while dampening inflammatory cytokine production, indicating its involvement in tissue homeostasis and fibrosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In other tumor types, LINC01140 displays additional context‐dependent roles. In lung cancer, for example, LINC01140 is overexpressed and promotes proliferation, migration, invasion, and even immune escape by interacting with miR‑33a‑5p/miR‑33b‑5p—thereby protecting c‑Myc and facilitating PD‑L1 upregulation—contributing to tumor growth and metastasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": " In glioma, upregulation of LINC01140 drives tumor progression by repressing miR‑199a‑3p and enhancing ZHX1 expression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " Furthermore, LINC01140 has been incorporated into prognostic lncRNA signatures in gastric cancer and has been identified as a hub within ceRNA networks in endometriosis, underscoring its diverse biological relevance."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these studies reveal that LINC01140 plays multifaceted and context‐dependent roles. It can function either as an oncogenic factor or as a tumor‐suppressive and anti‐inflammatory molecule by modulating ceRNA networks and regulating key downstream targets. Such versatility not only impacts cancer cell aggressiveness, chemoresistance, and immune escape but also influences inflammatory signaling and tissue remodeling, highlighting LINC01140’s potential as a prognostic biomarker and therapeutic target across a range of malignancies and inflammatory disorders.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Shuiqing Wu, Ran Xu, Xuan Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The long noncoding RNA LINC01140/miR-140-5p/FGF9 axis modulates bladder cancer cell aggressiveness and macrophage M2 polarization."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.202147"}], "href": "https://doi.org/10.18632/aging.202147"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33234721"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33234721"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Xueyuan Hu, Weiwei Han, Ning Lou "}, {"type": "b", "children": [{"type": "t", "text": "High Levels of LINC01140 Expression Predict a Good Prognosis and Improve Radiotherapy in Sarcoma Patients."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Crit Rev Eukaryot Gene Expr (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1615/CritRevEukaryotGeneExpr.2021038597"}], "href": "https://doi.org/10.1615/CritRevEukaryotGeneExpr.2021038597"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34587432"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34587432"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yanyun Wang, Man Li, Lin Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC01140 inhibits nonsmall cell lung cancer progression and cisplatin resistance through the miR-4742-5p/TACC1 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biochem Mol Toxicol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jbt.23048"}], "href": "https://doi.org/10.1002/jbt.23048"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35307914"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35307914"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Minghui Wang, Huilin Liu, Wenyao Wu, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Downregulation of LINC01140 is associated with adverse features of breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Lett (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/ol.2019.11147"}], "href": "https://doi.org/10.3892/ol.2019.11147"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31966045"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31966045"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Liping He, Xingsheng Zhao, Leping He "}, {"type": "b", "children": [{"type": "t", "text": "LINC01140 Alleviates the Oxidized Low-Density Lipoprotein-Induced Inflammatory Response in Macrophages via Suppressing miR-23b."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Inflammation (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10753-019-01094-y"}], "href": "https://doi.org/10.1007/s10753-019-01094-y"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31748847"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31748847"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Marina R Hadjicharalambous, Mark A Lindsay "}, {"type": "b", "children": [{"type": "t", "text": "Idiopathic Pulmonary Fibrosis: Pathogenesis and the Emerging Role of Long Non-Coding RNAs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ijms21020524"}], "href": "https://doi.org/10.3390/ijms21020524"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31947693"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31947693"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Marina R Hadjicharalambous, Benoit T Roux, Eszter Csomor, et al. 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| NCBI Gene ID | 339524 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC01140 has 460 functional associations with biological entities spanning 4 categories (chemical, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.
Click the + buttons to view associations for LINC01140 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC01140 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of LINC01140 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC01140 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01140 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CTD Gene-Chemical Interactions | chemicals interacting with LINC01140 gene/protein from the curated CTD Gene-Chemical Interactions dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC01140 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of LINC01140 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| GWAS Catalog SNP-Phenotype Associations | phenotypes associated with LINC01140 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01140 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC01140 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |