| Name | long intergenic non-protein coding RNA 1142 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n A recent genome‐wide association study (GWAS) of atrial fibrillation (AF) identified an intergenic variant (rs72700114) located between the long noncoding RNA gene LINC01142 and METTL11B, which is associated with increased AF risk (1). Although the study did not directly characterize the molecular function of LINC01142, its genomic proximity to the AF‐associated variant implicates it as a potential regulatory element that may influence myocardial structure and electrical function. In concert with other findings linking sarcomere and cytoskeletal gene variants to AF, the association of this noncoding region suggests that LINC01142 might play a role in modulating cardiac electrophysiology and contributing to the pathogenesis of AF via effects on gene regulation and myocardial tissue integrity (1).\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n (1)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Rosa B Thorolfsdottir, Gardar Sveinbjornsson, Patrick Sulem, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A Missense Variant in PLEC Increases Risk of Atrial Fibrillation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Am Coll Cardiol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jacc.2017.09.005"}], "href": "https://doi.org/10.1016/j.jacc.2017.09.005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29050564"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29050564"}]}]}]}
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| NCBI Gene ID | 284688 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC01142 has 148 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 3 datasets.
Click the + buttons to view associations for LINC01142 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01142 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC01142 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01142 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |