| Name | long intergenic non-protein coding RNA 1159 |
| Description | Predicted to act upstream of or within cerebellar cortex structural organization; homeostasis of number of cells within a tissue; and regulation of gene expression. Predicted to be located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Although none of the provided abstracts specifically mention LINC01159, the collection of studies paints a picture of how long noncoding RNAs (lncRNAs) function in regulating gene expression and cellular identity, especially in the nervous system. Many lncRNAs act in both local (cis) and distal (trans) manners to modulate transcriptional programs, frequently by interacting with transcription factors, chromatin‐modifying enzymes, and RNA‐binding proteins. For example, one study shows that a conserved intergenic lncRNA can regulate a nearby transcription factor (POU3F3) and, through interactions with DNA methyltransferase DNMT1, modulate the methylation and activity of distal promoters in neural differentiation (see."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Other studies underscore the importance of lncRNAs in animal models, where deletion or dysregulation of these transcripts impacts neural development, cortical neuron formation, and even contributes to disease phenotypes in disorders such as medulloblastoma or ALS."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In addition, lncRNAs have been implicated in higher-order processes—from guiding chromatin remodeling to coordinating the stability of mRNAs during neural stem cell differentiation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Their roles have been extended to influencing neurite outgrowth, synaptic plasticity, and even peripheral nerve regeneration."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Taken together, the diverse functions ascribed to these lncRNAs suggest that if LINC01159 follows similar mechanistic themes it may act as a fine‐tuner of gene expression—potentially by altering chromatin architecture, coordinating transcription factor activity, and modulating epigenetic marks in neural cells. In a broader view, LINC01159 might be expected to contribute to neural differentiation and function, as well as to cellular responses in development and disease."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "7", "end_ref": "9"}]}, {"type": "t", "text": " \n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Overall, while these abstracts do not provide direct evidence for LINC01159 function, they exemplify common lncRNA mechanisms – including cis/trans regulation of gene activity, interactions with epigenetic modifiers, and roles in neural circuit formation – that could be predictive of LINC01159’s involvement in similar pathways.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Vladislava Chalei, Stephen N Sansom, Lesheng Kong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The long non-coding RNA Dali is an epigenetic regulator of neural differentiation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Elife (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7554/eLife.04530"}], "href": "https://doi.org/10.7554/eLife.04530"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25415054"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25415054"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Martin Sauvageau, Loyal A Goff, Simona Lodato, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Multiple knockout mouse models reveal lincRNAs are required for life and brain development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Elife (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7554/eLife.01749"}], "href": "https://doi.org/10.7554/eLife.01749"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24381249"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24381249"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Federica Rey, Stefania Marcuzzo, Silvia Bonanno, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNAs Associated with Neuronal Development and Oncogenesis Are Deregulated in SOD1-G93A Murine Model of Amyotrophic Lateral Sclerosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomedicines (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/biomedicines9070809"}], "href": "https://doi.org/10.3390/biomedicines9070809"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34356873"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34356873"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Stephana Carelli, Toniella Giallongo, Federica Rey, et al. "}, {"type": "b", "children": [{"type": "t", "text": "HuR interacts with lincBRN1a and lincBRN1b during neuronal stem cells differentiation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "RNA Biol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/15476286.2019.1637698"}], "href": "https://doi.org/10.1080/15476286.2019.1637698"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31345103"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31345103"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Lei Chen, Peimin Feng, Xi Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA Malat1 promotes neurite outgrowth through activation of ERK/MAPK signalling pathway in N2a cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.12904"}], "href": "https://doi.org/10.1111/jcmm.12904"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27374227"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27374227"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Bin Pan, Heng-Xing Zhou, Yi Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Time-dependent differential expression of long non-coding RNAs following peripheral nerve injury."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Med (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/ijmm.2017.2963"}], "href": "https://doi.org/10.3892/ijmm.2017.2963"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28440471"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28440471"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Brian S Clark, Seth Blackshaw "}, {"type": "b", "children": [{"type": "t", "text": "Understanding the Role of lncRNAs in Nervous System Development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Adv Exp Med Biol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/978-981-10-5203-3_9"}], "href": "https://doi.org/10.1007/978-981-10-5203-3_9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28815543"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28815543"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Alexander D Ramos, Frank J Attenello, Daniel A Lim "}, {"type": "b", "children": [{"type": "t", "text": "Uncovering the roles of long noncoding RNAs in neural development and glioma progression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurosci Lett (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neulet.2015.12.025"}], "href": "https://doi.org/10.1016/j.neulet.2015.12.025"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26733304"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26733304"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Brian S Clark, Seth Blackshaw "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA-dependent transcriptional regulation in neuronal development and disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Genet (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fgene.2014.00164"}], "href": "https://doi.org/10.3389/fgene.2014.00164"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24936207"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24936207"}]}]}]}
|
| Synonyms | LINC-BRN1B |
| NCBI Gene ID | 102682016 |
| API | |
| Download Associations | |
| Predicted Functions |
![]() |
| Co-expressed Genes |
![]() |
| Expression in Tissues and Cell Lines |
![]() |
LINC01159 has 0 functional associations with biological entities spanning 0 categories () extracted from 0 datasets.
Click the + buttons to view associations for LINC01159 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary |
|---|