| Name | long intergenic non-protein coding RNA 1185 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Although none of the provided abstracts discuss LINC01185 explicitly, the collective findings offer insight into the emerging functional roles of long non‐coding RNAs (lncRNAs) that can be extrapolated to hypothesize about LINC01185. In general, lncRNAs have been implicated in epigenetic regulation, transcriptional control, and modulation of gene expression in both development and disease. For example, lncRNAs are shown to participate in the regulation of chromatin states and transcriptional programs that affect cellular differentiation and immune function (see."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " These regulatory layers are relevant in several disease contexts, including classical Hodgkin’s lymphoma"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ", autoimmune disorders"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ", and psoriatic disease"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": ", where genome‐wide association and integrative network studies have underscored the importance of non‐coding elements in modulating susceptibility. In addition, the discovery of disease-associated microdeletions encompassing a small number of protein-coding genes together with a lncRNA"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "further highlights how disruption of lncRNA loci can contribute to complex syndromes including neurodevelopmental and cognitive disorders. Moreover, computational network edge prediction approaches have successfully prioritized genetic associations by considering regulatory interactions, which suggests that similar integrative methods might reveal a role for LINC01185 in pathological processes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In summary, by analogy to other lncRNAs described in these studies, LINC01185 may be involved in the fine-tuning of gene expression networks through epigenetic and transcriptional regulation, thereby impacting cellular responses in immune, developmental, and disease contexts. However, its precise biological targets and mechanisms remain to be specifically elucidated.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Ilse I G M van de Vondervoort, Peter M Gordebeke, Nima Khoshab, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNAs in neurodevelopmental disorders."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Mol Neurosci (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fnmol.2013.00053"}], "href": "https://doi.org/10.3389/fnmol.2013.00053"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24415997"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24415997"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Emanuel Wyler, Jennifer Menegatti, Vedran Franke, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genome Biol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13059-017-1329-5"}], "href": "https://doi.org/10.1186/s13059-017-1329-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29089033"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29089033"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Victor Enciso-Mora, Peter Broderick, Yussanne Ma, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A genome-wide association study of Hodgkin's lymphoma identifies new susceptibility loci at 2p16.1 (REL), 8q24.21 and 10p14 (GATA3)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Genet (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ng.696"}], "href": "https://doi.org/10.1038/ng.696"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21037568"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21037568"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Carl D Langefeld, Hannah C Ainsworth, Deborah S Cunninghame Graham, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Transancestral mapping and genetic load in systemic lupus erythematosus."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncomms16021"}], "href": "https://doi.org/10.1038/ncomms16021"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28714469"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28714469"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Sara Rahmati, Lam Tsoi, Darren O'Rielly, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Complexities in Genetics of Psoriatic Arthritis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Curr Rheumatol Rep (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11926-020-0886-x"}], "href": "https://doi.org/10.1007/s11926-020-0886-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32166449"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32166449"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Miroslava Hancarova, Martina Simandlova, Jana Drabova, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A patient with de novo 0.45 Mb deletion of 2p16.1: the role of BCL11A, PAPOLG, REL, and FLJ16341 in the 2p15-p16.1 microdeletion syndrome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Med Genet A (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/ajmg.a.35783"}], "href": "https://doi.org/10.1002/ajmg.a.35783"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23495096"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23495096"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Daniel S Himmelstein, Sergio E Baranzini "}, {"type": "b", "children": [{"type": "t", "text": "Heterogeneous Network Edge Prediction: A Data Integration Approach to Prioritize Disease-Associated Genes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS Comput Biol (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pcbi.1004259"}], "href": "https://doi.org/10.1371/journal.pcbi.1004259"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26158728"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26158728"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Alejandra Villarreal-Martínez, Hugo Gallardo-Blanco, Ricardo Cerda-Flores, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Candidate gene polymorphisms and risk of psoriasis: A pilot study."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Exp Ther Med (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/etm.2016.3066"}], "href": "https://doi.org/10.3892/etm.2016.3066"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27073425"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27073425"}]}]}]}
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| NCBI Gene ID | 400957 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC01185 has 162 functional associations with biological entities spanning 2 categories (disease, phenotype or trait, cell line, cell type or tissue) extracted from 4 datasets.
Click the + buttons to view associations for LINC01185 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01185 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| GWAS Catalog SNP-Phenotype Associations | phenotypes associated with LINC01185 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset. | |
| HuGE Navigator Gene-Phenotype Associations | phenotypes associated with LINC01185 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01185 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |