LINC01189 Gene

Name long intergenic non-protein coding RNA 1189
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Long noncoding RNAs exhibit diverse functions in human diseases, and studies have begun to highlight context‐dependent roles for LINC01189. In patients with rheumatoid arthritis, screening of peripheral blood mononuclear cells revealed that LINC01189 is among several lncRNAs whose altered expression may serve as a diagnostic biomarker, correlating with clinical indexes and patient self‐perception (1). In contrast, investigations in hepatitis C virus–associated hepatocellular carcinoma indicate that LINC01189 is downregulated in tumor tissues and cell lines. Functional studies demonstrated that overexpression of LINC01189 suppresses cancer cell proliferation and chemoresistance to 5‐fluorouracil, at least in part through its interaction with and modulation of microRNA‐155‐5p, supporting a tumor‐suppressive role in the context of HCV‐linked liver cancer (2). Although other noncoding RNAs (such as miR-586 in breast cancer) are also implicated in oncogenic processes (3), the functional data concerning LINC01189 specifically underscore its potential utility both as a biomarker in inflammatory disease and as a tumor suppressor in HCV-associated carcinogenesis.\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n (1)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", (2)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ", (3)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jianting Wen, Jian Liu, Hui Jiang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "lncRNA expression profiles related to apoptosis and autophagy in peripheral blood mononuclear cells of patients with rheumatoid arthritis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FEBS Open Bio (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/2211-5463.12913"}], "href": "https://doi.org/10.1002/2211-5463.12913"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32569434"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32569434"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Ying Yao, Fang Shu, Fang Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC01189 is associated with HCV-hepatocellular carcinoma and regulates cancer cell proliferation and chemoresistance through hsa-miR-155-5p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Hepatol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.aohep.2020.09.013"}], "href": "https://doi.org/10.1016/j.aohep.2020.09.013"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33059056"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33059056"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Di Zhang, Xiaofeng Liu, Yun Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC01189-miR-586-ZEB1 feedback loop regulates breast cancer progression through Wnt/β-catenin signaling pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Ther Nucleic Acids (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.omtn.2021.06.007"}], "href": "https://doi.org/10.1016/j.omtn.2021.06.007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34513288"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34513288"}]}]}]}
NCBI Gene ID 643648
API
Download Associations
Predicted Functions View LINC01189's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC01189's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC01189's ARCHS4 Predicted Functions.

Functional Associations

LINC01189 has 112 functional associations with biological entities spanning 2 categories (functional term, phrase or reference, cell line, cell type or tissue) extracted from 2 datasets.

Click the + buttons to view associations for LINC01189 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC01189 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain LINC01189 protein from the LOCATE Predicted Protein Localization Annotations dataset.