| Name | long intergenic non-protein coding RNA 1312 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC01312 emerges as a gene of interest in two distinct contexts. In a study of otofaciocervical syndrome (OTFCS), a chromosomal deletion in 6q23—identified in a mother–daughter pair presenting with facial dysmorphisms, ear abnormalities with hearing loss, and shoulder girdle anomalies—highlighted a minimal overlapping region that includes LINC01312, suggesting that its loss or altered regulation may contribute to the OTFCS phenotype through disruption of developmental pathways, potentially linked to the Pax‐Six‐Eya‐Dach network."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In a separate study focused on lung adenocarcinoma (LAC), LINC01312 was one of ten genes identified via multivariate Cox regression modeling that stratified patients into distinct risk groups with differences in long-term outcomes. Here, the expression level of LINC01312—when integrated into a risk score staging system—proved to be a significant prognostic marker, distinguishing between high-risk patients with poorer outcomes and low-risk patients with better survival prospects."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Simone Gana, Angelo Valetto, Benedetta Toschi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Familial Interstitial 6q23.2 Deletion Including Eya4 Associated With Otofaciocervical Syndrome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Genet (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fgene.2019.00650"}], "href": "https://doi.org/10.3389/fgene.2019.00650"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31379922"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31379922"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yan-Yan Li, Chun Yang, Pingting Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-scale analysis to identify prognostic markers and predict the survival of lung adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.27144"}], "href": "https://doi.org/10.1002/jcb.27144"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30105759"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30105759"}]}]}]}
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| NCBI Gene ID | 154089 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC01312 has 318 functional associations with biological entities spanning 3 categories (disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 6 datasets.
Click the + buttons to view associations for LINC01312 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of LINC01312 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC01312 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01312 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| dbGAP Gene-Trait Associations | traits associated with LINC01312 gene in GWAS and other genetic association datasets from the dbGAP Gene-Trait Associations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC01312 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01312 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |