| Name | long intergenic non-protein coding RNA 1346 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n After careful review of the two provided abstracts, there is no mention or discussion of LINC01346 in either study. The first abstract"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "focuses on the role of the DEAD‐box helicase DDX5 in resolving RNA:DNA hybrid structures (R‐loops), which are implicated in DNA double-strand breaks and genomic instability. This study describes how DDX5, through its ATP-dependent helicase activity and association with the exoribonuclease XRN2, facilitates proper transcription termination and maintains genome integrity, with its function being modulated by arginine methylation via PRMT5."}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n The second abstract"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "reports on a genome-wide association study (GWAS) aimed at identifying potential genetic modifiers of clinical outcomes in Charcot-Marie-Tooth disease type 1A (CMT1A). It describes association signals that might contribute to the clinical variability observed in CMT1A patients. However, this study does not provide any information regarding LINC01346 or its biological function.\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In summary, neither of the two abstracts provided contains any functional data or discussion on LINC01346. As a result, no conclusions regarding the function of LINC01346 can be drawn from these studies.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Sofiane Y Mersaoui, Zhenbao Yu, Yan Coulombe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Arginine methylation of the DDX5 helicase RGG/RG motif by PRMT5 regulates resolution of RNA:DNA hybrids."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO J (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.15252/embj.2018100986"}], "href": "https://doi.org/10.15252/embj.2018100986"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31267554"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31267554"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Feifei Tao, Gary W Beecham, Adriana P Rebelo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Modifier Gene Candidates in Charcot-Marie-Tooth Disease Type 1A: A Case-Only Genome-Wide Association Study."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neuromuscul Dis (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3233/JND-190377"}], "href": "https://doi.org/10.3233/JND-190377"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30958311"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30958311"}]}]}]}
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| NCBI Gene ID | 728716 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC01346 has 228 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 4 datasets.
Click the + buttons to view associations for LINC01346 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC01346 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01346 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC01346 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01346 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |