| Name | long intergenic non-protein coding RNA 1425 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nBPIFB1 is a secreted protein that plays an important role in lung homeostasis and immune regulation. Autoimmune targeting of lung‐specific BPIFB1 is linked to interstitial lung disease (ILD) in patients with autoimmune syndromes such as APS1, and autoantibodies against BPIFB1 have been detected not only in APS1‐ILD but also in subsets of patients with connective tissue disease–associated and idiopathic ILD. In parallel, immunolocalization studies in mice have revealed that BPIFB1 is expressed in select subsets of goblet cells in the nasal passages and pharynx as well as in specific serous glands, suggesting a tissue‐restricted role in the airway and upper respiratory tract."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its role in mature tissues, BPIFB1 (also referred to as LPLUNC1 in some studies) has been implicated in developmental processes. Transient and asymmetric expression of a related form in the embryonic mouse node suggests that lipid‐binding and transfer functions of BPIFB1 may contribute to left–right axis formation. Moreover, increased BPIFB1 transcript levels in parotid acinar cells from non‐obese diabetic mice—an animal model of Sjögren’s syndrome—highlight its potential involvement in exocrine gland pathology."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the airway, BPIFB1 is emerging as a key regulator of mucus composition and mucociliary clearance. Genetic mapping studies identified BPIFB1 as a candidate gene underlying natural variation in airway levels of the major mucin MUC5B. Subsequent investigations demonstrated that BPIFB1 modulates mucus biophysical and biochemical properties, with knockout studies in mice showing impaired mucociliary clearance in the absence of this protein. Although research in related fields (such as studies on CETP inhibitors in metabolic dysfunction) provides a contrasting perspective on protein modulators in systemic physiology, the collective genetic and in vivo functional data firmly establish BPIFB1 as an important component of airway defense."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Anthony K Shum, Mohammad Alimohammadi, Catherine L Tan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "BPIFB1 is a lung-specific autoantigen associated with interstitial lung disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Transl Med (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/scitranslmed.3006998"}], "href": "https://doi.org/10.1126/scitranslmed.3006998"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24107778"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24107778"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Maslinda Musa, Kirsty Wilson, Le Sun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Differential localisation of BPIFA1 (SPLUNC1) and BPIFB1 (LPLUNC1) in the nasal and oral cavities of mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Tissue Res (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00441-012-1490-9"}], "href": "https://doi.org/10.1007/s00441-012-1490-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22986921"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22986921"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Juan Hou, Kenta Yashiro, Yasushi Okazaki, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of a novel left-right asymmetrically expressed gene in the mouse belonging to the BPI/PLUNC superfamily."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dev Dyn (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/dvdy.10450"}], "href": "https://doi.org/10.1002/dvdy.10450"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14745963"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14745963"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "T Nashida, K Yoshimura, S Yoshie, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Upregulation of Bpifb1 expression in the parotid glands of non-obese diabetic mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oral Dis (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/odi.12377"}], "href": "https://doi.org/10.1111/odi.12377"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26769076"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26769076"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Lauren J Donoghue, Alessandra Livraghi-Butrico, Kathryn M McFadden, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "trans"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " Protein QTL for Secreted Airway Mucins in Mice and a Causal Role for "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "Bpifb1"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": "."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genetics (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1534/genetics.117.300211"}], "href": "https://doi.org/10.1534/genetics.117.300211"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28851744"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28851744"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Lauren J Donoghue, Matthew R Markovetz, Cameron B Morrison, et al. "}, {"type": "b", "children": [{"type": "t", "text": "BPIFB1 loss alters airway mucus properties and diminishes mucociliary clearance."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Lung Cell Mol Physiol (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajplung.00390.2022"}], "href": "https://doi.org/10.1152/ajplung.00390.2022"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37847709"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37847709"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "François Briand, Quentin Thieblemont, Agnès André, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CETP inhibitor torcetrapib promotes reverse cholesterol transport in obese insulin-resistant CETP-ApoB100 transgenic mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Transl Sci (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1752-8062.2011.00344.x"}], "href": "https://doi.org/10.1111/j.1752-8062.2011.00344.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22212222"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22212222"}]}]}]}
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| NCBI Gene ID | 101927821 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC01425 has 3 functional associations with biological entities spanning 1 categories (gene, protein or microRNA) extracted from 1 datasets.
Click the + buttons to view associations for LINC01425 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC01425 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |