LINC01538 Gene

Name long intergenic non-protein coding RNA 1538
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough none of the provided abstracts directly mention LINC01538, they collectively elucidate mechanisms by which chromatin‐modifying complexes regulate transcription in diverse physiologic systems—a framework that may eventually shed light on the function of long noncoding RNAs such as LINC01538. In murine cardiac development, for example, FOG‐2 acts as a transcriptional co‐regulator by interacting with members of the NuRD nucleosome remodeling complex; its repression motif requires association with metastasis‐associated proteins to attenuate GATA4‐dependent gene expression and ensure proper cardiac morphogenesis. This study underscores the importance of multi‐protein interactions for transcriptional control and highlights a paradigm by which regulatory complexes might interface with other modulators, including potential noncoding RNAs."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}, {"type": "p", "children": [{"type": "t", "text": "\nIn the adaptive immune system and ovarian physiology, similar principles apply. In T follicular helper cells, the transcription factor Bcl6 utilizes its middle domain to recruit MTA3—thereby repressing genes such as Prdm1—to drive proper CD4 T‐cell differentiation. In parallel, within ovarian granulosa cells, MTA3 interacts with core NuRD and cohesin complex proteins to regulate cyclin expression and cell cycle progression during the G2/M phase. These findings illustrate how MTA3‐containing complexes integrate signals to fine‐tune both lineage specification and cell proliferation, suggesting that similar regulatory circuits might involve long intergenic noncoding RNAs like LINC01538 in modulating gene expression networks."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ""}, {"type": "p", "children": [{"type": "t", "text": "\nIn testicular Leydig cells, expression of MTA3 is dynamically regulated by hormonal and metabolic signals, where it plays a critical role in maintaining steroidogenic function. Ablation of MTA3 not only perturbs progesterone secretion but also correlates with altered testosterone levels, especially in metabolic disorders such as type 2 diabetes mellitus. This work further emphasizes the extensive influence of NuRD complex components in diverse cellular contexts and prompts future investigations into whether lncRNAs like LINC01538 might interact with these protein networks to influence chromatin architecture and endocrine function."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}]}]}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Andrea E Roche, Brett J Bassett, Sadhana A Samant, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The zinc finger and C-terminal domains of MTA proteins are required for FOG-2-mediated transcriptional repression via the NuRD complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Mol Cell Cardiol (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.yjmcc.2007.10.023"}], "href": "https://doi.org/10.1016/j.yjmcc.2007.10.023"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18067919"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18067919"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Jakub Kwintkiewicz, Elizabeth Padilla-Banks, Wendy N Jefferson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Metastasis-associated protein 3 (MTA3) regulates G2/M progression in proliferating mouse granulosa cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biol Reprod (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1095/biolreprod.111.096032"}], "href": "https://doi.org/10.1095/biolreprod.111.096032"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22075476"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22075476"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "J Philip Nance, Simon Bélanger, Robert J Johnston, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Bcl6 middle domain repressor function is required for T follicular helper cell differentiation and utilizes the corepressor MTA3."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1507312112"}], "href": "https://doi.org/10.1073/pnas.1507312112"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26460037"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26460037"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Ke He, Hu Qu, Hui Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Regulated and Functional Expression of the Corepressor MTA3 in Rodent Testis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Endocrinology (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1210/en.2016-1213"}], "href": "https://doi.org/10.1210/en.2016-1213"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27673553"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27673553"}]}]}]}
NCBI Gene ID 400654
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Predicted Functions View LINC01538's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC01538's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC01538's ARCHS4 Predicted Functions.

Functional Associations

LINC01538 has 0 functional associations with biological entities spanning 0 categories () extracted from 0 datasets.

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Dataset Summary