LOC388242 Gene

Name coiled-coil domain containing 101 pseudogene
NCBI Gene ID 388242
API
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Predicted Functions View LOC388242's ARCHS4 Predicted Functions.
Co-expressed Genes View LOC388242's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LOC388242's ARCHS4 Predicted Functions.

Functional Associations

LOC388242 has 605 functional associations with biological entities spanning 4 categories (molecular profile, organism, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.

Click the + buttons to view associations for LOC388242 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LOC388242 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LOC388242 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at LOC388242 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LOC388242 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of LOC388242 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LOC388242 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of LOC388242 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of LOC388242 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LOC388242 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of LOC388242 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of LOC388242 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.