Name | FSHD region gene 1 pseudogene |
Synonyms | FRG1JP |
NCBI Gene ID | 642236 |
API | |
Download Associations | |
Predicted Functions |
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Co-expressed Genes |
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Expression in Tissues and Cell Lines |
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LOC642236 has 1,180 functional associations with biological entities spanning 7 categories (molecular profile, organism, chemical, disease, phenotype or trait, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 22 datasets.
Click the + buttons to view associations for LOC642236 from the datasets below.
If available, associations are ranked by standardized value
Dataset | Summary | |
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CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LOC642236 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
CHEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LOC642236 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
CHEA Transcription Factor Targets | transcription factors binding the promoter of LOC642236 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LOC642236 gene from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LOC642236 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LOC642236 gene from the ENCODE Histone Modification Site Profiles dataset. | |
ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LOC642236 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
ENCODE Transcription Factor Targets | transcription factors binding the promoter of LOC642236 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
GDSC Cell Line Gene Expression Profiles | cell lines with high or low expression of LOC642236 gene relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset. | |
GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of LOC642236 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LOC642236 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of LOC642236 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LOC642236 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of LOC642236 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of LOC642236 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of LOC642236 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LOC642236 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of LOC642236 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain LOC642236 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LOC642236 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LOC642236 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
TRANSFAC Predicted Transcription Factor Targets | transcription factors regulating expression of LOC642236 gene predicted using known transcription factor binding site motifs from the TRANSFAC Predicted Transcription Factor Targets dataset. | |