LRP4-AS1 Gene

Name LRP4 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n The abstract (1) does not provide any information regarding the function of LRP4‐AS1. Instead, it focuses on the prognostic value of circulating tumor cell (CTC) detection and the associated genomic landscape in breast cancer patients with brain metastases. In this study, two enrichment methods for CTCs—an EpCAM‐dependent approach and an EpCAM‐independent Ficoll-based centrifugation—were employed, and their detection rates were correlated with clinical features such as ERBB2 status, bone metastases, and overall survival. In addition, next-generation sequencing analyses of individual CTCs and matched tumor tissues revealed chromosomal aberrations and mutations in pathways potentially related to brain metastasis formation. However, at no point is LRP4‐AS1 mentioned or its function discussed, leaving its role in this context unresolved."}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Carlotta Riebensahm, Simon A Joosse, Malte Mohme, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Clonality of circulating tumor cells in breast cancer brain metastasis patients."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Breast Cancer Res (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13058-019-1184-2"}], "href": "https://doi.org/10.1186/s13058-019-1184-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31481116"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31481116"}]}]}]}
NCBI Gene ID 100507401
API
Download Associations
Predicted Functions View LRP4-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View LRP4-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LRP4-AS1's ARCHS4 Predicted Functions.

Functional Associations

LRP4-AS1 has 837 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.

Click the + buttons to view associations for LRP4-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of LRP4-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LRP4-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LRP4-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LRP4-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LRP4-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of LRP4-AS1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
HuBMAP Azimuth Cell Type Annotations cell types associated with LRP4-AS1 gene from the HuBMAP Azimuth Cell Type Annotations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LRP4-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of LRP4-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LRP4-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.