MAMDC2-AS1 Gene

Name MAMDC2 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Long noncoding RNAs (lncRNAs) have emerged as key regulators of gene transcription under diverse biological conditions. In several high‐throughput studies, MAMDC2‑AS1 has been implicated in modulating host cellular responses in both viral infections and cancers. For instance, during herpes simplex virus type 1 (HSV‑1) infection, altered lncRNA expression—including that of MAMDC2‑AS1—appears to influence host transcriptional programs by affecting pathways involved in chromatin assembly, neuronal development, and innate immune responses (see"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "and."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Furthermore, by integrating gene interaction networks into survival prediction models, studies have identified MAMDC2‑AS1 as part of prognostic signatures in cancers such as glioblastoma multiforme and esophageal squamous cell carcinoma, suggesting its potential role in tumor progression and patient risk stratification."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Additional analyses in neuroblastoma have also highlighted MAMDC2‑AS1 among critical lncRNAs that may contribute to tumor pathogenesis, metastasis, and relapse."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Collectively, these findings indicate that MAMDC2‑AS1 is a multifunctional lncRNA involved in the regulation of key host transcriptional networks during viral infection and in the progression of various cancers.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Benxia Hu, Yongxia Huo, Guijun Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Functional prediction of differentially expressed lncRNAs in HSV-1 infected human foreskin fibroblasts."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Virol J (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12985-016-0592-5"}], "href": "https://doi.org/10.1186/s12985-016-0592-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27496175"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27496175"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yiliang Wang, Lianzhou Huang, Yun Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Single-cell RNA-sequencing analysis identifies host long noncoding RNA MAMDC2-AS1 as a co-factor for HSV-1 nuclear transport."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Biol Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7150/ijbs.42556"}], "href": "https://doi.org/10.7150/ijbs.42556"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32226304"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32226304"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Wei Wang, Wei Liu "}, {"type": "b", "children": [{"type": "t", "text": "Integration of gene interaction information into a reweighted random survival forest approach for accurate survival prediction and survival biomarker discovery."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-018-31497-0"}], "href": "https://doi.org/10.1038/s41598-018-31497-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30181543"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30181543"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Bharat Prajapati, Mena Fatma, Mahar Fatima, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of lncRNAs Associated With Neuroblastoma in Cross-Sectional Databases: Potential Biomarkers."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Mol Neurosci (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fnmol.2019.00293"}], "href": "https://doi.org/10.3389/fnmol.2019.00293"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31920530"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31920530"}]}]}]}
NCBI Gene ID 100507244
API
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Predicted Functions View MAMDC2-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View MAMDC2-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MAMDC2-AS1's ARCHS4 Predicted Functions.

Functional Associations

MAMDC2-AS1 has 701 functional associations with biological entities spanning 3 categories (chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 8 datasets.

Click the + buttons to view associations for MAMDC2-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of MAMDC2-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MAMDC2-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of MAMDC2-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of MAMDC2-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of MAMDC2-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of MAMDC2-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of MAMDC2-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MAMDC2-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.