MATN1-AS1 Gene

Name MATN1 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nMATN1-AS1 is a long non-coding RNA with oncogenic properties that plays crucial roles in cancer progression. In osteosarcoma, MATN1-AS1 is significantly overexpressed in tumor tissues and cell lines, and its elevated levels correlate with advanced Enneking staging, lung metastasis, and distinct histologic subtypes. Functionally, knockdown of MATN1-AS1 impairs cell proliferation, migration, and invasion by sponging miR-1299, while high levels of this lncRNA predict shorter overall and recurrence-free survival, thereby underscoring its potential as both a prognostic marker and a therapeutic target."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n \nSimilarly, in cervical cancer, MATN1-AS1 is markedly upregulated in cancer tissues as well as in patient serum, compared to adjacent normal tissues and benign lesions. Its expression is positively correlated with that of miR-200b, and increased levels are associated with poor differentiation, larger tumor sizes (≥4 cm), advanced FIGO stages (III–IV), and lymph node metastasis, which in turn reflect a lower 3-year survival rate. Silencing MATN1-AS1 in cervical cancer cell lines leads to a reduction in miR-200b expression, suggesting that MATN1-AS1 functions as a competing endogenous RNA (ceRNA) modulating miR-200b and contributing to cervical cancer progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yongxiang Liu, Dawei Wang, Qinghui Ji, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA MATN1-AS1 for Prediction of Prognosis in Osteosarcoma Patients and Its Cellular Function."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Biotechnol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12033-021-00394-9"}], "href": "https://doi.org/10.1007/s12033-021-00394-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34542816"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34542816"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Lijie He, Pu Li, Heping Zhang "}, {"type": "b", "children": [{"type": "t", "text": "Clinical significance of MATN1-AS1 as ceRNA of Mir-200b in tissues and serum of patients with cervical cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-023-42023-2"}], "href": "https://doi.org/10.1038/s41598-023-42023-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37714866"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37714866"}]}]}]}
NCBI Gene ID 100129196
API
Download Associations
Predicted Functions View MATN1-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View MATN1-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MATN1-AS1's ARCHS4 Predicted Functions.

Functional Associations

MATN1-AS1 has 973 functional associations with biological entities spanning 5 categories (organism, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 18 datasets.

Click the + buttons to view associations for MATN1-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of MATN1-AS1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of MATN1-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of MATN1-AS1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MATN1-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with MATN1-AS1 gene from the CellMarker Gene-Cell Type Associations dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MATN1-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of MATN1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of MATN1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of MATN1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of MATN1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of MATN1-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of MATN1-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of MATN1-AS1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
HuGE Navigator Gene-Phenotype Associations phenotypes associated with MATN1-AS1 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MATN1-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of MATN1-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MATN1-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of MATN1-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.