MIR1246 Gene

HGNC Family Non-coding RNAs
Name microRNA 1246
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
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Additional studies have demonstrated that miR‐1246 promotes motility in oral cancer via DENN/MADD Domain Containing 2D (DENND2D) inhibition, enhances liver cancer stemness by activating the Wnt/β‐catenin pathway via suppression of AXIN2 and GSK3β, and upregulates pro‐inflammatory mediators in breast mesenchymal stromal cells. Collectively, these findings underscore the critical role of miR‐1246 in promoting cancer progression, invasion, metastasis, and the establishment of a tumor‐promoting immunosuppressive microenvironment."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "20"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nMechanistic studies have further revealed that miR‐1246 not only exerts its functions through a spectrum of direct targets but also exhibits non‐canonical biogenesis. It originates as a degradation product of RNU2-1 rather than from the classical Drosha/Dicer pathway, a finding that helps explain its remarkable enrichment in exosomes derived from malignant cells. Furthermore, miR‐1246 modulates key signaling axes such as DR5 in lung cancer to confer radioresistance and influences inflammatory as well as stemness pathways in various settings—it targets TERF2IP, regulates DYRK1A downstream of p53-family activation, and modulates the STAT3 pathway via LRIG1 in acute myeloid leukemia. Its presence in circulating body fluids (serum, urine, saliva, cerebrospinal fluid) has rendered it a promising non‐invasive biomarker for early diagnosis and prognostication across multiple cancers, including cervical, bladder, pancreatic, and esophageal malignancies. These diverse mechanistic insights, obtained from studies addressing hepatic ischemia/reperfusion injury, inflammatory bowel disease, and therapeutic response prediction, underscore the multifaceted roles of miR-1246 as both a functional mediator and a robust biomarker."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "21", "end_ref": "38"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond oncological settings, miR‐1246 plays significant roles in diverse non‐cancerous physiological and pathological processes. In cardiovascular and musculoskeletal systems, exosomal miR‐1246 from mesenchymal stem cells has been shown to alleviate hepatic ischemia/reperfusion injury and improve cardiac function via modulation of the IL‑6/gp130‑STAT3 and PRSS23/Snail signaling pathways. It also participates in osteoarthritis pathogenesis by regulating inflammatory mediators, influences corneal neovascularization through a MIAT/ACE axis, and is implicated in hemophilia A by modulating factor VIII expression. Moreover, its protective functions have been documented in skin photoaging, where miR‐1246–enriched adipose‑derived stem cell exosomes attenuate UVB‑induced damage, and in thyroid cancer where it suppresses tumor growth by targeting the PI3K adapter PIK3AP1. These studies highlight miR‑1246 as a pleiotropic regulator whose dysregulation contributes not only to cancer but also to diverse systemic pathologies."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "39", "end_ref": "49"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Tomer Cooks, Ioannis S Pateras, Lisa M Jenkins, et al. 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Synonyms MIRN1246, HSA-MIR-1246
NCBI Gene ID 100302142
API
Download Associations
Predicted Functions View MIR1246's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR1246's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR1246's ARCHS4 Predicted Functions.

Functional Associations

MIR1246 has 235 functional associations with biological entities spanning 5 categories (molecular profile, disease, phenotype or trait, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.

Click the + buttons to view associations for MIR1246 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR1246 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR1246 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of MIR1246 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR1246 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
CTD Gene-Disease Associations diseases associated with MIR1246 gene/protein from the curated CTD Gene-Disease Associations dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR1246 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR1246 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with MIR1246 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of MIR1246 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR1246 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR1246 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR1246 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR1246 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.