| HGNC Family | Non-coding RNAs |
| Name | microRNA 1299 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nmiR‑1299 has emerged as a pivotal regulatory microRNA in a spectrum of malignancies. In several studies, reduced miR‑1299 levels correlate with enhanced tumor cell proliferation, migration, invasion, and metastasis. For example, in hepatocellular carcinoma, downregulation of miR‑1299 leads to overexpression of cyclin‑dependent kinase 6 (CDK6) and accelerated cell cycle progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Similarly, in triple‑negative breast cancer, high levels of circular RNA ciRS‑7, which harbors multiple binding sites for miR‑1299, serve as a competing endogenous RNA to sequester miR‑1299; this sponging effect subsequently elevates matrix metalloproteinases and promotes invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Further investigations in prostate cancer, cholangiocarcinoma, breast cancer, osteosarcoma, ovarian cancer, gastric cancer, and cervical cancer have demonstrated that miR‑1299 exerts tumor‑suppressive functions by directly targeting key oncogenes such as CDK6, STAT3, NOTCH3, PDPK1, and GBX2—underscoring its broad impact on malignancy progression."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "4", "end_ref": "12"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nMechanistic studies have revealed that miR‑1299’s tumor‑suppressive capacity is frequently impaired by its sequestration within intricate competing endogenous RNA (ceRNA) networks. Multiple circular RNAs—such as ciRS‑7 in triple‑negative breast cancer, circ_0005230 in cholangiocarcinoma, hsa_circ_0136666 in breast cancer, and circ_ARF3 in osteosarcoma—as well as long non‑coding RNAs like KCNQ1OT1 in cervical cancer, have been shown to “sponge” miR‑1299. By binding to miR‑1299, these non‑coding RNAs limit its ability to repress oncogenic targets (e.g., CDK6, NOTCH3, PDPK1), thus indirectly promoting cell cycle progression and tumor aggressiveness.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond malignant contexts, miR‑1299 is implicated in several non‑cancerous conditions. In rheumatic heart disease, miR‑1299 is notably upregulated compared with healthy controls, suggesting a role in disease regulation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": " In melasma, miR‑1299 expression is inversely correlated with arginase‑2 levels, implicating it in the modulation of pigmentation through effects on autophagy and cellular senescence."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "14"}]}, {"type": "t", "text": " Additionally, in drug‑resistant prolactinoma, elevated miR‑1299 targets and inhibits FOXO1, leading to enhanced prolactin secretion and contributing to therapeutic resistance."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "15"}]}, {"type": "t", "text": " Preliminary findings in other pathologies—notably intracranial aneurysm and schizophrenia—further suggest that miR‑1299 may serve as a versatile modulator of cellular homeostasis in both oncologic and non‑oncologic settings."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "16"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Huaqiang Zhu, Guangchuan Wang, Xu Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "miR-1299 suppresses cell proliferation of hepatocellular carcinoma (HCC) by targeting CDK6."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Pharmacother (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.biopha.2016.07.037"}], "href": "https://doi.org/10.1016/j.biopha.2016.07.037"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27490780"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27490780"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yong Wang, Zhi Lu, Ningning Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MicroRNA-1299 is a negative regulator of STAT3 in colon cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/or.2017.5605"}], "href": "https://doi.org/10.3892/or.2017.5605"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28498395"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28498395"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Meixiang Sang, Lingjiao Meng, Sihua Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Circular RNA ciRS-7 Maintains Metastatic Phenotypes as a ceRNA of miR-1299 to Target MMPs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cancer Res (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/1541-7786.MCR-18-0284"}], "href": "https://doi.org/10.1158/1541-7786.MCR-18-0284"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30072582"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30072582"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "F-B Zhang, Y Du, Y Tian, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MiR-1299 functions as a tumor suppressor to inhibit the proliferation and metastasis of prostate cancer by targeting NEK2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_201901_16865"}], "href": "https://doi.org/10.26355/eurrev_201901_16865"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30720160"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30720160"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Yi Xu, Yue Yao, Yueping Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Elevation of circular RNA circ_0005230 facilitates cell growth and metastasis via sponging miR-1238 and miR-1299 in cholangiocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.101872"}], "href": "https://doi.org/10.18632/aging.101872"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30946694"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30946694"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Li-Hong Liu, Qing-Qing Tian, Juan Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Upregulation of hsa_circ_0136666 contributes to breast cancer progression by sponging miR-1299 and targeting CDK6."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.28536"}], "href": "https://doi.org/10.1002/jcb.28536"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30993801"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30993801"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Ai-Mei Gao, Chunyan Yuan, Ai-Xin Hu, et al. 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| Synonyms | MIRN1299, HSA-MIR-1299 |
| NCBI Gene ID | 100302167 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR1299 has 109 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 2 datasets.
Click the + buttons to view associations for MIR1299 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of MIR1299 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR1299 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |