MIR130B Gene

HGNC Family Non-coding RNAs
Name microRNA 130b
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nMicroRNA‐130b (miR‑130b) plays a versatile role in tumor progression by modulating epithelial–mesenchymal transition (EMT), invasion and metastasis in a context‐dependent manner. In endometrial cancer cells harboring mutant p53, for example, miR‑130b is transcriptionally repressed, thereby relieving inhibition of the ZEB1 EMT driver and promoting invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In HTLV‑1–transformed T cells its elevated expression directly targets the tumor suppressor TP53INP1, favoring cell survival and expansion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In colorectal cancer, increased miR‑130b levels suppress PTEN expression leading to the over‐expression of the immune checkpoint molecule B7‑H1"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ", and in other colorectal tumor models, miR‑130b targets peroxisome proliferator‑activated receptor γ (PPARγ) to deregulate key mediators of EMT and angiogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " In breast cancer, high miR‑130b contributes to drug resistance and invasive behavior"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": ", while in hepatocellular carcinoma elevated miR‑130b associates with dedifferentiated, aggressive tumors."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " Likewise, in endometrial cancer models with DICER1 dysfunction, miR‑130b up‐regulation further promotes EMT."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " In contrast, in prostate cancer certain studies indicate that restoration of miR‑130b suppresses cell migration and invasion through direct targeting of matrix metalloproteinase‑2"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": ", and in a separate colorectal cancer investigation, reduced miR‑130b levels were linked to increased integrin β1 expression and enhanced cell motility."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its impact on metastatic traits, miR‑130b also regulates cell proliferation and chemoresponsiveness. In pancreatic cancer, miR‑130b is significantly downregulated and its enforced expression suppresses STAT3 activity, thereby inducing apoptosis and cell cycle arrest."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " In pituitary adenomas, overexpression of miR‑130b arrests cell cycle progression via targeting cyclin A2, limiting proliferation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": " In multiple myeloma, upregulation of miR‑130b decreases glucocorticoid receptor levels, dampening the cellular response to glucocorticoid‐induced apoptosis and contributing to drug resistance."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": " Furthermore, miR‑130b has been implicated in the regulation of hepatic drug metabolism, where its elevated expression in cholestatic liver models represses key nuclear receptors and cytochrome P450 enzymes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": " In thyroid cancer, deregulated miR‑130b mediated by T3/TR signaling pathways has also been observed"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "14"}]}, {"type": "t", "text": ", while in ovarian carcinoma, heightened miR‑130b expression in drug‐resistant cells coincides with modulation of multidrug resistance genes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "15"}]}, {"type": "t", "text": " Finally, in endocrine settings such as polycystic ovary syndrome (PCOS), reduced levels of miR‑130b in ovarian theca cells correlate with increased expression of DENND1A variant 2 and consequent hyperandrogenism."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "16"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nmiR‑130b also contributes to the pathogenesis of non‑malignant and inflammatory disorders, as well as serving as a circulating biomarker in diverse disease settings. In renal pathologies, diminished circulating miR‑130b levels associate with increased proteinuria and tubulointerstitial fibrosis in diabetic nephropathy"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "18"}]}, {"type": "t", "text": ", whereas in lupus nephritis, elevated serum miR‑130b‑3p facilitates epithelial–mesenchymal transition in tubular cells via ERBB2IP suppression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "20"}]}, {"type": "t", "text": " In sarcomas, such as Ewing sarcoma, increased miR‑130b enhances metastatic potential by targeting ARHGAP1 and activating CDC42 signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "21"}]}, {"type": "t", "text": " Moreover, in prostate cancer, a c‑Met/miR‑130b axis has been shown to promote castration resistance by inhibiting androgen receptor expression"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "22"}]}, {"type": "t", "text": ", while in bladder transitional cell carcinoma, miR‑130b enhances NF‑κB signaling through CYLD downregulation, contributing to tumor aggressiveness."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "24"}]}, {"type": "t", "text": " In non‑small cell lung cancer, high miR‑130b levels promote invasion via targeting tissue inhibitor of metalloproteinase‑2"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "25"}]}, {"type": "t", "text": ", and in osteosarcoma, miR‑130b activates Wnt signaling by repressing NKD2."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "26"}]}, {"type": "t", "text": " Additionally, the detection of miR‑130b in exosomes has been proposed as a prognostic biomarker in aggressive medulloblastoma"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "27"}]}, {"type": "t", "text": "and as part of a three‑miRNA signature predictive of outcome in clear cell renal cell carcinoma."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "28"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "P Dong, M Karaayvaz, N Jia, et al. 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Synonyms MIR-130B, MIRN130B
NCBI Gene ID 406920
API
Download Associations
Predicted Functions View MIR130B's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR130B's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR130B's ARCHS4 Predicted Functions.

Functional Associations

MIR130B has 1,537 functional associations with biological entities spanning 6 categories (molecular profile, functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 21 datasets.

Click the + buttons to view associations for MIR130B from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR130B gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR130B gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of MIR130B gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores cellular components co-occuring with MIR130B protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR130B gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
CTD Gene-Disease Associations diseases associated with MIR130B gene/protein from the curated CTD Gene-Disease Associations dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores diseases co-occuring with MIR130B gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR130B gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR130B gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR130B gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with MIR130B gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing MIR130B from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of MIR130B gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of MIR130B gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of MIR130B gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR130B gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR130B gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR130B gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR130B gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores tissues co-occuring with MIR130B protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.
WikiPathways Pathways 2014 pathways involving MIR130B protein from the Wikipathways Pathways 2014 dataset.