MIR153-1 Gene

HGNC Family Non-coding RNAs
Name microRNA 153-1
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
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Moreover, its activity is commonly modulated by sponging interactions with long noncoding and circular RNAs (for example, CASC15, circRBMS3, KCNQ1OT1 and others), which further fine‐tune oncogenic signaling pathways and affect tumor cell stemness."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "16"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its impact on cell motility and differentiation, miR‐153–1 also modulates the sensitivity of cancer cells to chemotherapeutic agents. For instance, in hepatocellular carcinoma its upregulation has been associated with reduced drug efficacy through modulation of the PTEN/FOXO1 axis, while in esophageal squamous cell carcinoma miR‐153–1 enhances cisplatin sensitivity by targeting Nrf2. Furthermore, in colorectal and pancreatic cancers miR‐153–1 affects autophagy and apoptosis—via targeting molecules like Bcl‐2 and Snail—to reverse resistance to oxaliplatin and gemcitabine."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "17", "end_ref": "20"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond oncogenesis, miR‐153–1 is implicated in a range of other biological and pathological processes through its diverse regulatory networks. In neurodegenerative disorders such as Parkinson’s disease and epilepsy, miR‐153–1 (operating together with miR‐7) regulates α‐synuclein translation, thereby influencing neuronal survival and inflammatory responses. Its ability to target components of the TGF‐β pathway (via TGFBR2) also positions miR‐153–1 as an anti‐fibrotic agent in pulmonary fibrosis. Moreover, miR‐153–1 expression is itself regulated by—and in turn interacts with—a variety of long noncoding and circular RNAs in settings such as NSCLC, osteosarcoma, oral cancer and head and neck cancers, where these competing endogenous RNAs (e.g. NEAT1, TUG1, FGD5‐AS1, KTN1‐AS1 and KCNQ1OT1) sequester miR‐153–1 to modulate EMT and hypoxia‐responsive signaling. Epigenetic modulation of histone biotinylation and even genetic variants in miR‐153–1 have been linked to broader clinical phenotypes including cocaine dependence."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "21", "end_ref": "37"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Ziqing Wu, Benfu He, Jincan He, et al. 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Synonyms MIR-153-1, MIRN153-1
NCBI Gene ID 406944
API
Download Associations
Predicted Functions View MIR153-1's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR153-1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR153-1's ARCHS4 Predicted Functions.

Functional Associations

MIR153-1 has 1,269 functional associations with biological entities spanning 5 categories (molecular profile, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 15 datasets.

Click the + buttons to view associations for MIR153-1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR153-1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR153-1 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of MIR153-1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR153-1 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR153-1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR153-1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with MIR153-1 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing MIR153-1 from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of MIR153-1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of MIR153-1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR153-1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR153-1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of MIR153-1 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR153-1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR153-1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.