MIR197 Gene

HGNC Family Non-coding RNAs
Name microRNA 197
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nmiR‐197 is a versatile regulatory microRNA implicated in multiple human diseases. In several solid tumors, miR‐197 acts as a critical modulator of cancer cell behavior. For instance, in pancreatic cancer, increased levels of miR‐197 induce epithelial–mesenchymal transition by targeting p120 catenin, thereby promoting invasion and metastatic potential."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In oral squamous cell carcinoma, miR‐197 is integrated in a competing endogenous RNA network involving lncRNA SNHG20 and LIN28 that affects cellular proliferation and stemness."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Similarly, in bladder cancer, miR‐197–3p is modulated by long noncoding RNAs such as LINC00641 and LINC00312 to regulate tumor suppressors like KLF10 and impact the PTEN/PI3K/AKT pathway as well as cell migration and invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " In non–small cell lung and prostate cancers, distinct isoforms of miR‐197 (e.g. miR‐197–3p) target molecules including p120 catenin and VDAC1, contributing respectively to chemoresistance and tumor‐suppressive signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn hematologic malignancies, miR‐197’s tumor‐suppressive role is further underscored. Its deregulation has been associated with multiple myeloma, where it may help counterbalance oncogenic signals"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": ", and in Burkitt lymphoma, cellular miR‐197 collaborates with Epstein–Barr virus–derived miRNAs to regulate key inflammatory receptors such as IL‐1β receptor type I."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the context of viral infection, miR‐197 is downregulated by enterovirus 71, which leads to the derepression of the host protein RAN—a factor that facilitates viral replication—thereby highlighting a mechanism by which viruses may subvert normal cellular control."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nmiR‐197 also contributes to the regulation of the tumor microenvironment and influences metastasis in diverse settings. In glioma, for example, a regulatory axis involving lncRNA DLX6‐AS1 and miR‐197–5p modulates E2F1 expression and thereby impacts tumor progression, while distinct circular RNAs (such as circ_0029426) have been shown to sponge miR‐197, affecting glioma cell behavior."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " Exosomal miR‐197–3p in nasopharyngeal carcinoma has been demonstrated to modulate radioresistance by targeting the endoplasmic reticulum chaperone HSPA5 and subsequently influencing the AKT/mTOR pathway"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": ", and a similar exosome‐mediated mechanism in lung adenocarcinoma promotes angiogenesis and metastasis via the inhibition of TIMP2 and TIMP3."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": " Moreover, in glioblastoma, upregulation of miR‐197 by FUS1 contributes to suppressing tumor growth and invasiveness."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "14"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its roles in tumorigenesis, miR‐197 serves as a valuable circulating biomarker. In cardiovascular disease, circulating miR‐197 is involved in endovascular inflammation and platelet activation, suggesting its potential for diagnosis in coronary artery disease."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "15"}]}, {"type": "t", "text": " Similarly, altered miR‐197 expression in non–small cell lung cancer correlates with prognosis and risk stratification for brain metastases."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "16"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nmiR‐197 further modulates the response to chemotherapeutics. In colorectal cancer, its downregulation following exposure to 5‐fluorouracil (5‐FU) contributes to drug resistance"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "18"}]}, {"type": "t", "text": ", while in gastric cancer, miR‐197 targeting of MAPK1 is implicated in the modulation of 5‐FU sensitivity."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "19"}]}, {"type": "t", "text": " Additionally, a regulatory axis involving the lncRNA JPX and miR‐197 affects autophagy and cell migration via modulation of CXCR6, further impacting gastric cancer progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "20"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn other tumor types and pathological conditions, miR‐197 exerts tumor‐suppressive functions. In fibrosarcoma, overexpression of miR‐197–5p induces cellular senescence and curtails metastatic behavior by targeting KIAA0101."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "21"}]}, {"type": "t", "text": " Furthermore, in the context of developmental defects, differential binding of miR‐197 to allelic variants in the 3′UTR of MTHFD1L may influence the risk of neural tube defects."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "22"}]}, {"type": "t", "text": " In autoinflammatory diseases such as familial Mediterranean fever, miR‐197–3p exerts anti‐inflammatory effects by directly targeting IL‐1β receptor, thereby modulating the inflammatory cascade."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "23"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFinally, modulation of miR‐197 expression has been linked to alterations in lipid metabolism. 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Synonyms MIRN197, MIRNA197, MIR-197
NCBI Gene ID 406974
API
Download Associations
Predicted Functions View MIR197's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR197's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR197's ARCHS4 Predicted Functions.

Functional Associations

MIR197 has 625 functional associations with biological entities spanning 6 categories (molecular profile, functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 19 datasets.

Click the + buttons to view associations for MIR197 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR197 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores cellular components co-occuring with MIR197 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR197 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
CTD Gene-Disease Associations diseases associated with MIR197 gene/protein from the curated CTD Gene-Disease Associations dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores diseases co-occuring with MIR197 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR197 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR197 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR197 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GAD Gene-Disease Associations diseases associated with MIR197 gene in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with MIR197 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing MIR197 from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of MIR197 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of MIR197 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
HuGE Navigator Gene-Phenotype Associations phenotypes associated with MIR197 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR197 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR197 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR197 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR197 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores tissues co-occuring with MIR197 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.