| HGNC Family | Non-coding RNAs |
| Name | microRNA 199b |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nmiR‐199b plays critical non–tumorigenic roles in modulating stress‐related and repair pathways in cardiovascular, renal, and inflammatory settings. In the heart, miR‐199b is induced as a calcineurin/NFAT target that drives pathological hypertrophy and fibrosis in heart failure—with its inhibition proving capable of reversing these maladaptive changes. In the kidney and vascular system, aberrant miR‐199b expression contributes to diabetic nephropathy and post–ischemic injury by modulating epithelial–mesenchymal transition and by fine‐tuning key regulators such as SIRT1 and klotho. In addition, exosome–mediated delivery of regulatory circRNAs that modulate miR‐199b levels has been shown to protect myocardial cells from hypoxia/reoxygenation injury, while suppression of miR‐199b in monocytes limits excessive inflammatory signaling that underlies rejection episodes following lung transplantation and may influence stroke recovery through altered microRNA binding to VEGF mRNA."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn cancer settings miR‐199b exhibits context–dependent functions that often converge on the regulation of key oncogenic and tumor–suppressive pathways. In certain pediatric and central nervous system tumors such as medulloblastoma and choriocarcinoma, loss of miR‐199b leads to de–repression of targets like Hes1, SET, and CD15, thereby promoting an aggressive, metastatic phenotype. In several hematological malignancies—including acute and chronic myeloid leukemia—downregulation of miR‐199b is associated with enhanced expression of proteins such as PODXL, DDR1 and resistance to targeted therapies. Moreover, in a wide spectrum of solid tumors such as colorectal, breast, hepatocellular, ovarian, cervical, head and neck, and thyroid carcinomas, reduced miR‐199b levels (or, in particular contexts, selective strand alterations) deregulate diverse effectors including HER2, RGS17, integrin α3, PAK4, STON2, and multiple components of the Notch, hypoxia (HIF–1α) and GSK3β pathways. Restoration of miR‐199b expression in these cancer models suppresses cell proliferation, migration, invasion, and in some cases improves drug sensitivity—highlighting its potential utility as a prognostic biomarker and therapeutic target."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "8", "end_ref": "44"}, {"type": "fg_f", "ref": "25"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond stress–response and malignancy, miR‐199b also regulates fundamental differentiation and developmental processes. During osteogenesis of bone marrow stromal cells, up–regulation of miR‐199b robustly promotes osteoblast differentiation via the GSK–3β/β–catenin axis. In parallel, miR‐199b is induced during erythroid maturation under the control of GATA–1/NF–E2 and acts to fine–tune levels of key regulators such as c–Kit, while in the decidual tissue its modulation is implicated in pregnancy maintenance. Additionally, enhanced miR‐199b expression in mesenchymal stem cells supports chondrogenic differentiation by targeting components of the Notch pathway. These findings together underscore the pleiotropic nature of miR‐199b as a modulator of both pathological and developmental processes."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "45", "end_ref": "48"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Paula A da Costa Martins, Kanita Salic, Monika M Gladka, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MicroRNA-199b targets the nuclear kinase Dyrk1a in an auto-amplification loop promoting calcineurin/NFAT signalling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Cell Biol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncb2126"}], "href": "https://doi.org/10.1038/ncb2126"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21102440"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21102440"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Wen-Ling Kang, Gao-Si Xu "}, {"type": "b", "children": [{"type": "t", "text": "Atrasentan increased the expression of klotho by mediating miR-199b-5p and prevented renal tubular injury in diabetic nephropathy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep19979"}], "href": "https://doi.org/10.1038/srep19979"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26813039"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26813039"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jing Zhao, Yun Bai, Lei Jin, et al. 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| Synonyms | MIRN199B, MIR-199B |
| NCBI Gene ID | 406978 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR199B has 779 functional associations with biological entities spanning 6 categories (molecular profile, disease, phenotype or trait, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 18 datasets.
Click the + buttons to view associations for MIR199B from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR199B gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR199B gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of MIR199B gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| CTD Gene-Disease Associations | diseases associated with MIR199B gene/protein from the curated CTD Gene-Disease Associations dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR199B gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR199B gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MIR199B gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| ESCAPE Omics Signatures of Genes and Proteins for Stem Cells | PubMedIDs of publications reporting gene signatures containing MIR199B from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset. | |
| GeneRIF Biological Term Annotations | biological terms co-occuring with MIR199B gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing MIR199B from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of MIR199B gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of MIR199B gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of MIR199B gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR199B gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of MIR199B gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of MIR199B gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR199B gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| WikiPathways Pathways 2014 | pathways involving MIR199B protein from the Wikipathways Pathways 2014 dataset. | |