| HGNC Family | Non-coding RNAs |
| Name | microRNA 28 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nMicroRNA‐28 (miR‐28), expressed as two mature products (miR‐28‑5p and miR‐28‑3p), is emerging as an important regulator in cancer, acting in a context‐dependent manner to either suppress or promote tumorigenesis. In several studies, miR‐28‑5p has been shown to directly target key oncogenic transcripts such as the antioxidant transcription factor Nrf2 in breast epithelial cells, the thrombopoietin receptor MPL in myeloproliferative neoplasms, MAD2L1 and BAG1 in Burkitt lymphoma, RAP1B in renal cell carcinoma, IGF1 in hepatocellular carcinoma, PTEN in non–small‐cell lung cancer, and MTSS1 in esophageal cancer. In addition, aberrant expression of miR‐28 (including both the 5p and 3p arms) has been associated with metastasis, recurrence, and poor clinical outcome in colorectal cancer, osteosarcoma, cholangiocarcinoma, and other malignancies. Moreover, competing endogenous RNAs (for example, CCAT1 and MCM3AP‑AS1) have been reported to sponge miR‑28‑5p in cancers such as castration‐resistant prostate cancer and breast cancer, thus impeding its tumor‐suppressive effects."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "24"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its role in modulating cancer cell proliferation, migration, invasion, and apoptosis, miR‐28 also participates in diverse regulatory circuits in non–tumor‐cell contexts. In vascular and hematologic settings, dysregulation of miR‑28 has been implicated in aberrant glycolytic metabolism—for instance, by targeting the glycolytic enzyme triose‐phosphate isomerase—and in the modulation of signaling pathways involved in endothelial senescence, parathyroid hormone regulation, and diagnostic biomarker identification in conditions like pulmonary embolism and hereditary hemorrhagic telangiectasia. Moreover, competing endogenous RNA networks (such as those involving CRNDE in chronic lymphocytic leukemia) and epigenetic alterations (including promoter methylation impacting miR‑28 expression in multiple myeloma) further underline the complexity by which miR‑28 influences diverse cellular and biochemical processes."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "25", "end_ref": "33"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its roles in disease, miR‐28 is involved in normal physiological processes such as cellular differentiation, tissue regeneration, and aging. Elevated miR‐28 expression has been observed during the osteogenic differentiation of mesenchymal stem cells—where it promotes differentiation by targeting negative regulators like STAT1—and in liver regeneration, where long noncoding RNAs (for example, LINC00265) modulate hepatocyte proliferation through miR‑28 sequestration. Altered circulating miR‑28‑5p levels have also been identified as potential biomarkers of premature aging, as observed in conditions such as Down syndrome."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "34", "end_ref": "38"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Wei Xu, Jian-Yong Li, Lei Fan, et al. 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| Synonyms | MIRN28, HSA-MIR-28, MIR-28 |
| NCBI Gene ID | 407020 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR28 has 166 functional associations with biological entities spanning 5 categories (disease, phenotype or trait, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 6 datasets.
Click the + buttons to view associations for MIR28 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CTD Gene-Disease Associations | diseases associated with MIR28 gene/protein from the curated CTD Gene-Disease Associations dataset. | |
| GeneRIF Biological Term Annotations | biological terms co-occuring with MIR28 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing MIR28 from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of MIR28 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of MIR28 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR28 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |