MIR3120 Gene

HGNC Family Non-coding RNAs
Name microRNA 3120
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nMIR3120 is a microRNA with multifaceted roles in the regulation of cell migration, angiogenesis, tumor cell stemness, and invasion. In endothelial progenitor cells, MIR3120-5p functions as a regulatory component within a molecular decoy system involving the long noncoding RNA WTAPP1. Here, MIR3120-5p binding to WTAPP1 results in the downregulation of MMP-1 expression and modulation of the PI3K/Akt/mTOR signaling and autophagy pathways, thereby affecting EPC migration, invasion, and angiogenic tube formation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn several cancer types, altered MIR3120-5p expression plays critical roles in tumor progression. In colon cancer, high MIR3120-5p levels promote cancer stem cell properties and invasiveness by directly targeting Axin2, which contributes to tumor recurrence and metastasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Similarly, in non‐small cell lung cancer, upregulation of MIR3120-5p fosters cell proliferation, enhances colony formation, and accelerates cell cycle progression by repressing the tumor suppressor KLF4."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " In contrast, in gallbladder cancer, the miR‐214/3120 cluster functions in a tumor‐suppressive manner by targeting E2F3 to inhibit both epithelial‐to‐mesenchymal transition (EMT) and autophagy, thereby curbing tumorigenicity and metastatic behavior."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nMoreover, the diagnostic potential of MIR3120 has been highlighted in the context of lung squamous cell carcinoma. Elevated levels of MIR3120 detected in serum extracellular vesicles provide a promising noninvasive biomarker to distinguish primary lung squamous cell carcinoma from metastatic lesions originating in head and neck squamous cell carcinoma."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Wen-Dong Li, Dong-Ming Zhou, Li-Li Sun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA WTAPP1 Promotes Migration and Angiogenesis of Endothelial Progenitor Cells via MMP1 Through MicroRNA 3120 and Akt/PI3K/Autophagy Pathways."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Stem Cells (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/stem.2904"}], "href": "https://doi.org/10.1002/stem.2904"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30171660"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30171660"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Li Hongdan, Li Feng "}, {"type": "b", "children": [{"type": "t", "text": "miR-3120-5p promotes colon cancer stem cell stemness and invasiveness through targeting Axin2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2018.01.021"}], "href": "https://doi.org/10.1016/j.bbrc.2018.01.021"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29307822"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29307822"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Hongwei Xu, Quan Wen "}, {"type": "b", "children": [{"type": "t", "text": "miR‑3120‑5p acts as a diagnostic biomarker in non‑small cell lung cancer and promotes cancer cell proliferation and invasion by targeting KLF4."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2018.9454"}], "href": "https://doi.org/10.3892/mmr.2018.9454"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30221715"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30221715"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Wujun Li, Pu Yan, Xiaofen Meng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The microRNA cluster miR-214/miR-3120 prevents tumor cell switching from an epithelial to a mesenchymal-like phenotype and inhibits autophagy in gallbladder cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Signal (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.cellsig.2020.109887"}], "href": "https://doi.org/10.1016/j.cellsig.2020.109887"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33340658"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33340658"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Yoshihisa Shimada, Jun Matsubayashi, Akira Saito, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Small RNA sequencing to differentiate lung squamous cell carcinomas from metastatic lung tumors from head and neck cancers."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0248206"}], "href": "https://doi.org/10.1371/journal.pone.0248206"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33668046"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33668046"}]}]}]}
Synonyms MIR-3120
NCBI Gene ID 100422882
API
Download Associations
Predicted Functions View MIR3120's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR3120's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR3120's ARCHS4 Predicted Functions.

Functional Associations

MIR3120 has 303 functional associations with biological entities spanning 5 categories (molecular profile, chemical, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.

Click the + buttons to view associations for MIR3120 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3120 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR3120 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of MIR3120 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3120 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR3120 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR3120 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR3120 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of MIR3120 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR3120 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3120 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR3120 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR3120 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
WikiPathways Pathways 2014 pathways involving MIR3120 protein from the Wikipathways Pathways 2014 dataset.