MIR3129 Gene

HGNC Family Non-coding RNAs
Name microRNA 3129
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent evidence in hepatocellular carcinoma (HCC) indicates that miR‐3129, particularly its 5p strand, plays a pivotal role in modulating chemoresistance and metastatic potential. In one study, upregulation of the long non‐coding RNA MALAT1 in doxorubicin‐resistant HCC cells was found to sponge miR‐3129-5p, thereby releasing its repression on Nova1. This regulatory axis promoted cell proliferation, migration, invasion, and ultimately contributed to doxorubicin resistance. In a related investigation, HCC‐derived extracellular vesicles were shown to deliver miR‐3129, suggesting that intercellular transfer of this miRNA may further influence HCC progression and dissemination."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn epithelial ovarian cancer (EOC), miR‐3129 functions as an important tumor suppressor. Functional assays demonstrated that miR‐3129 directly binds to the 3′ untranslated region of CD44 mRNA. Overexpression of miR‐3129 in EOC cell lines led to reduced CD44 levels, which in turn inhibited cell proliferation and altered the response to the chemotherapeutic agent bufalin. Importantly, ectopic overexpression of CD44 reversed the anti-cancer effects elicited by miR‐3129 upregulation, underscoring its role in modulating CD44‐mediated oncogenic pathways in EOC."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its roles in cancer biology, altered expression of miR‐3129 has also been linked to cardiovascular pathology. Clinical profiling revealed that serum levels of miR‐3129-5p are elevated in patients with coronary heart disease (CHD) and correlate with the severity of arterial stenosis. Mechanistic studies identified mTOR as a direct target of miR‐3129-5p; suppression of mTOR signaling led to decreased phosphorylation of S6 and increased autophagy, as evidenced by elevated LC3II/LC3I and Beclin1 expression. These findings suggest that miR‐3129 may serve both as a biomarker and a potential therapeutic target in CHD."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yongxian Cao, Feng Zhang, Haotian Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA MALAT1 mediates doxorubicin resistance of hepatocellular carcinoma by regulating miR-3129-5p/Nova1 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biochem (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11010-020-03904-6"}], "href": "https://doi.org/10.1007/s11010-020-03904-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32965597"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32965597"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yang Yang, Feifei Mao, Lei Guo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tumor cells derived-extracellular vesicles transfer miR-3129 to promote hepatocellular carcinoma metastasis by targeting TXNIP."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dig Liver Dis (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.dld.2021.01.003"}], "href": "https://doi.org/10.1016/j.dld.2021.01.003"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33563583"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33563583"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Xiaochun Sun, Manhua Cui, Lingling Tong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Upregulation of microRNA-3129 suppresses epithelial ovarian cancer through CD44."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Gene Ther (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41417-018-0026-1"}], "href": "https://doi.org/10.1038/s41417-018-0026-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29915283"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29915283"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Zhen-Yu Wang, Ting Zhao, Jing Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Elevated serum miR-3129-5p contributes to the progression of coronary heart disease via targeting mTOR."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Kaohsiung J Med Sci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/kjm2.12333"}], "href": "https://doi.org/10.1002/kjm2.12333"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33336524"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33336524"}]}]}]}
Synonyms MIR-3129
NCBI Gene ID 100422908
API
Download Associations
Predicted Functions View MIR3129's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR3129's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR3129's ARCHS4 Predicted Functions.

Functional Associations

MIR3129 has 205 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.

Click the + buttons to view associations for MIR3129 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3129 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3129 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR3129 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR3129 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR3129 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR3129 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3129 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR3129 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR3129 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.