MIR3146 Gene

HGNC Family Non-coding RNAs
Name microRNA 3146
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nMembrane-anchored serine proteases, such as TMPRSS13, play essential roles in mammalian development and tissue homeostasis. In murine models, disruption of Tmprss13 compromised skin barrier function, underscoring its developmental importance."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In parallel, heightened expression of TMPRSS13 in breast cancer has been linked to increased tumor burden, enhanced proliferation, and invasive capacity, suggesting an oncogenic role that may be therapeutically targeted."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn contrast to these protein‐based regulatory mechanisms, recent investigations have highlighted the role of microRNAs in disease processes. Notably, miR‑3146 has been shown to regulate the formation of neutrophil extracellular traps (NETs), a process that contributes directly to the inflammatory milieu characteristic of gout. This regulatory function implicates miR‑3146 as a key mediator in the pathogenesis of gout, where NET formation plays a central role."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nTogether, these findings illustrate a complex regulatory network in which both proteolytic enzymes and microRNAs orchestrate critical biological functions. While TMPRSS13 influences tissue integrity and tumor progression, miR‑3146 specifically modulates innate immune responses through NET formation during gout. Elucidating the precise mechanisms of miR‑3146 may offer promising avenues for therapeutic intervention in inflammatory arthritis.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Daniel H Madsen, Roman Szabo, Alfredo A Molinolo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TMPRSS13 deficiency impairs stratum corneum formation and epidermal barrier acquisition."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem J (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1042/BJ20140337"}], "href": "https://doi.org/10.1042/BJ20140337"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24832573"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24832573"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Andrew S Murray, Thomas E Hyland, Kimberley E Sala-Hamrick, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The cell-surface anchored serine protease TMPRSS13 promotes breast cancer progression and resistance to chemotherapy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41388-020-01436-3"}], "href": "https://doi.org/10.1038/s41388-020-01436-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32868877"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32868877"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Lizhen Shan, Di Yang, Fabo Feng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "miR-3146 induces neutrophil extracellular traps to aggravate gout flare."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Lab Anal (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcla.24032"}], "href": "https://doi.org/10.1002/jcla.24032"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34606644"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34606644"}]}]}]}
Synonyms MIR-3146
NCBI Gene ID 100422967
API
Download Associations
Predicted Functions View MIR3146's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR3146's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR3146's ARCHS4 Predicted Functions.

Functional Associations

MIR3146 has 280 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.

Click the + buttons to view associations for MIR3146 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3146 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3146 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR3146 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR3146 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR3146 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR3146 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3146 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of MIR3146 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR3146 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR3146 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.