| HGNC Family | Non-coding RNAs |
| Name | microRNA 3180-3 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe collection of studies provided focuses on characterizing novel cell‐surface receptors that regulate immune responses in diverse physiological and pathological settings. For instance, investigations into the determinants of viral host tropism demonstrated that receptors such as CD300lf and CD300ld serve as functional entry points for murine norovirus, with their direct engagement being essential for productive infection and subsequent viral progeny production."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther studies have delineated the roles of paired immunoreceptors in fine-tuning inflammatory responses. In particular, the balance between inhibitory and activating receptors—for example, LMIR3 (CLM-1) versus LMIR4 (CLM-5), and the activating LMIR7 (CLM-3)—has been shown to dictate cytokine production, cell activation, and synergistic signaling with toll-like receptors in myeloid cells, mast cells, and monocytes/macrophages."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition, data concerning receptors primarily expressed on neutrophils, such as MAIR-IV, underscore the critical role these molecules play in mediating proinflammatory cytokine release and overall innate immune activation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Notably, although these studies provide a wealth of insight into receptors that control immune cell function in infectious, inflammatory, and tumor contexts, none of them directly address or mention MIR3180-3. Therefore, the specific biological function of MIR3180-3 remains undefined in these publications and its potential involvement in the immune regulatory networks highlighted herein warrants further investigation.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Kei Haga, Akira Fujimoto, Reiko Takai-Todaka, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Functional receptor molecules CD300lf and CD300ld within the CD300 family enable murine noroviruses to infect cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1605575113"}], "href": "https://doi.org/10.1073/pnas.1605575113"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27681626"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27681626"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Chaoxiong Wang, Xichen Zheng, Jinlan Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CD300ld on neutrophils is required for tumour-driven immune suppression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41586-023-06511-9"}], "href": "https://doi.org/10.1038/s41586-023-06511-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37674079"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37674079"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Kumi Izawa, Jiro Kitaura, Yoshinori Yamanishi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Functional analysis of activating receptor LMIR4 as a counterpart of inhibitory receptor LMIR3."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M701100200"}], "href": "https://doi.org/10.1074/jbc.M701100200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17438331"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17438331"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Yutaka Enomoto, Yoshinori Yamanishi, Kumi Izawa, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Characterization of leukocyte mono-immunoglobulin-like receptor 7 (LMIR7)/CLM-3 as an activating receptor: its similarities to and differences from LMIR4/CLM-5."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M110.137166"}], "href": "https://doi.org/10.1074/jbc.M110.137166"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20817736"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20817736"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Takako Nakano, Satoko Tahara-Hanaoka, Chigusa Nakahashi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Activation of neutrophils by a novel triggering immunoglobulin-like receptor MAIR-IV."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Immunol (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molimm.2007.04.011"}], "href": "https://doi.org/10.1016/j.molimm.2007.04.011"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17543387"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17543387"}]}]}]}
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| NCBI Gene ID | 100422836 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR3180-3 has 331 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.
Click the + buttons to view associations for MIR3180-3 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR3180-3 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR3180-3 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR3180-3 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MIR3180-3 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of MIR3180-3 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of MIR3180-3 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR3180-3 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |