| HGNC Family | Non-coding RNAs |
| Name | microRNA 3619 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nMiR‐3619–5p is emerging as a critical tumor‐suppressive microRNA across multiple human cancers. Several studies have demonstrated that its expression is reduced in malignancies such as breast, prostate, hepatocellular, and stomach cancers, where it normally functions to inhibit oncogenic processes. For example, in breast cancer cells with lower aggressiveness, high endogenous miR‐3619 levels decrease the translation of key enzymes like PLD2, thereby contributing to a less invasive phenotype."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Similarly, in prostate cancer, overexpression of miR‐3619–5p directly induces CDKN1A expression and downregulates downstream cell cycle proteins, leading to marked inhibition of cell growth."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In hepatocellular carcinoma, bioinformatic and experimental data revealed that circZFR exerts its carcinogenic effect by sponging miR‐3619–5p, ultimately resulting in upregulation of CTNNB1 and activation of the Wnt/β‐catenin pathway."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAt the molecular level, miR‐3619–5p targets a spectrum of oncogenes and tumor progression mediators. In retinoblastoma, for instance, miR‐3619–5p directly binds to regulatory sites in the promoters of genes such as RIN1, and its sequestration by lncRNAs like LINC00202 facilitates tumor progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " In cutaneous squamous cell carcinoma, reduced levels of miR‐3619–5p, partly due to altered regulation by endogenous factors, lead to increased expression of KPNA4, which contributes to both enhanced proliferation and cisplatin resistance."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond these direct tumor‐suppressive roles, miR‐3619–5p participates in regulating additional cellular processes. In non–small cell lung cancer, for example, it is sponged by HOXA11-AS, and its restoration results in reduced SALL4 expression, decreased proliferation, and diminished glycolytic activity."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " In airway smooth muscle cells relevant to pediatric asthma, inhibition of miR‐3619–5p by LINC00882 leads to enhanced β–catenin signaling and cell proliferation in response to PDGF stimulation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " Moreover, in stomach and liver cancers, upregulation of miR‐3619–5p has been associated with reduced cell growth, underscoring its function as a broad-spectrum inhibitor of oncogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " In colorectal cancer, miR‐3619–5p is repressed by lncRNA LINC00958, leading to increased invasion and proliferation, while in the regulation of osteogenic differentiation, miR‐3619–5p targets BMP2 and is itself regulated by LINC01535."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " In another retinoblastoma study, the lncRNA HCP5 was shown to sponge miR‐3619–5p, causing elevated HDAC9 levels and enhanced tumor cell aggressiveness."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": " Finally, in cutaneous squamous cell carcinoma angiogenesis, miR‐3619–5p negatively regulates ROCK2 expression; its downregulation due to sequestration by circ_TNFRSF21 promotes tube formation induced by M2 macrophages."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Kristen Fite, Julian Gomez-Cambronero "}, {"type": "b", "children": [{"type": "t", "text": "Down-regulation of MicroRNAs (MiRs) 203, 887, 3619 and 182 Prevents Vimentin-triggered, Phospholipase D (PLD)-mediated Cancer Cell Invasion."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M115.686006"}], "href": "https://doi.org/10.1074/jbc.M115.686006"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26567912"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26567912"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Senmao Li, Chenghe Wang, Xiao Yu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "miR-3619-5p inhibits prostate cancer cell growth by activating CDKN1A expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/or.2016.5250"}], "href": "https://doi.org/10.3892/or.2016.5250"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27878260"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27878260"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Aichun Tan, Qiongxuan Li, Lizhang Chen "}, {"type": "b", "children": [{"type": "t", "text": "CircZFR promotes hepatocellular carcinoma progression through regulating miR-3619-5p/CTNNB1 axis and activating Wnt/β-catenin pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arch Biochem Biophys (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.abb.2018.11.020"}], "href": "https://doi.org/10.1016/j.abb.2018.11.020"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30468709"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30468709"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Guigang Yan, Yi Su, Zhao Ma, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long Noncoding RNA LINC00202 Promotes Tumor Progression by Sponging miR-3619-5p in Retinoblastoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Struct Funct (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1247/csf.18033"}], "href": "https://doi.org/10.1247/csf.18033"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30905893"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30905893"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Mingfeng Zhang, Heng Luo, Li Hui "}, {"type": "b", "children": [{"type": "t", "text": "MiR-3619-5p hampers proliferation and cisplatin resistance in cutaneous squamous-cell carcinoma via KPNA4."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2019.03.203"}], "href": "https://doi.org/10.1016/j.bbrc.2019.03.203"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30967266"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30967266"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Hongwei Xia, Qingling Niu, Yanguang Ding, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding HOXA11-AS knockdown suppresses the progression of non-small cell lung cancer by regulating miR-3619-5p/SALL4 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Mol Histol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10735-021-09981-1"}], "href": "https://doi.org/10.1007/s10735-021-09981-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34050851"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34050851"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Zengfang Liu, Linghua Mei, Zhaoping He "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA00882 contributes to platelet-derived growth factor-induced proliferation of human fetal airway smooth muscle cells by enhancing Wnt/β-catenin signaling via sponging miR-3619-5p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2019.04.106"}], "href": "https://doi.org/10.1016/j.bbrc.2019.04.106"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31014672"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31014672"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Yinhua Liu, Jiaping Li, Sufeng Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "STAT4-mediated down-regulation of miR-3619-5p facilitates stomach adenocarcinoma by modulating TBC1D10B."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Biol Ther (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/15384047.2020.1754690"}], "href": "https://doi.org/10.1080/15384047.2020.1754690"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32397798"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32397798"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Peipei Hao, Fengming Yue, Xian Xian, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "M2 macrophage facilitated angiogenesis in cutaneous squamous cell carcinoma via circ_TNFRSF21/miR-3619-5p/ROCK axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Kaohsiung J Med Sci (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/kjm2.12555"}], "href": "https://doi.org/10.1002/kjm2.12555"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35593591"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35593591"}]}]}]}
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| NCBI Gene ID | 100500828 |
| API | |
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| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR3619 has 274 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.
Click the + buttons to view associations for MIR3619 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR3619 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR3619 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR3619 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR3619 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MIR3619 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of MIR3619 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR3619 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of MIR3619 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR3619 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |