MIR3659 Gene

HGNC Family Non-coding RNAs
Name microRNA 3659
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent investigations into the molecular mechanisms underlying metabolic abnormalities have implicated MIR3659 as a regulatory miRNA associated with dyslipidemia in obese individuals. In this context, altered levels of MIR3659 appear to influence gene expression networks that modulate lipid metabolism and energy balance, providing novel insights into the pathogenesis of obesity‐related dyslipidemia."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "In the realm of liver cancer research, transcriptomic profiling has identified a spectrum of noncoding RNAs—including MIR3659—that may drive the heterogeneous progression of hepatocellular carcinoma. The deregulation of MIR3659 in hepatocellular carcinoma suggests it could be instrumental in modulating oncogenic pathways, thereby contributing to the tumor’s diverse phenotypes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "Furthermore, emerging diagnostic strategies for prostate cancer have leveraged biofluid-based measurements of tumor microRNAs. Notably, the urinary ratio involving hsv2-miR-H9 and hsa-miR-3659 has been evaluated for its efficacy as a non-invasive biomarker for prostate cancer detection, underscoring MIR3659’s potential clinical utility in cancer diagnostics."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Liu Miao, Rui-Xing Yin, Shang-Ling Pan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Circulating miR-3659 may be a potential biomarker of dyslipidemia in patients with obesity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Transl Med (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12967-019-1776-8"}], "href": "https://doi.org/10.1186/s12967-019-1776-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30642348"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30642348"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Ji-Hye Choi, So M Kwon, Sung U Moon, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TPRG1-AS1 induces RBM24 expression and inhibits liver cancer progression by sponging miR-4691-5p and miR-3659."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Liver Int (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/liv.15026"}], "href": "https://doi.org/10.1111/liv.15026"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34328265"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34328265"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Ho Won Kang, Young Joon Byun, Sung Min Moon, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Urinary hsv2-miR-H9 to hsa-miR-3659 ratio is an effective marker for discriminating prostate cancer from benign prostate hyperplasia in patients within the prostate-specific antigen grey zone."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Investig Clin Urol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4111/icu.20210493"}], "href": "https://doi.org/10.4111/icu.20210493"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35244999"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35244999"}]}]}]}
Synonyms MIR-3659
NCBI Gene ID 100500801
API
Download Associations
Predicted Functions View MIR3659's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR3659's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR3659's ARCHS4 Predicted Functions.

Functional Associations

MIR3659 has 304 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.

Click the + buttons to view associations for MIR3659 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3659 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3659 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR3659 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR3659 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR3659 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR3659 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3659 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR3659 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR3659 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.