MIR3665 Gene

HGNC Family Non-coding RNAs
Name microRNA 3665
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
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Its activity is linked to processes such as cell migration, invasion, metastasis, and even the maintenance of stem cell–like properties in cancer cells."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther studies in the set extensively detail TWIST1’s involvement in developmental processes and tissue homeostasis. In particular, TWIST1 is implicated in craniofacial morphogenesis, the regulation of cytokine signaling, and the maintenance of the balance between mesenchymal proliferation and differentiation. TWIST1 functions via interactions with co-factors and signaling pathways such as NF-κB, STAT3, FGFR2, and components of the Mi2/NuRD complex, thereby affecting inflammatory responses and the proper formation of structures including cranial sutures and limb elements."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "10"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther reports further connect TWIST1 activity to oncogenic processes such as resistance to chemotherapeutic agents and the promotion of cancer stem cell–related traits via multiple signaling “axes” (for instance, the STAT3–TWIST1–AKT2 pathway), as well as to the regulation of endothelial–mesenchymal transition (EndMT) in cardiovascular pathologies."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "11", "end_ref": "14"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn sum, while these studies provide an in‐depth characterization of TWIST1—as a master regulator of EMT, metastasis, developmental patterning, and various cell signaling cascades—the function of MIR3665 remains unaddressed. There is no evidence in the supplied literature linking MIR3665 to these or any other processes; hence, any role for MIR3665 must await future investigation to determine whether it might intersect with TWIST1-regulated networks or operate in an independent pathway."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "15"}, {"type": "fg_f", "ref": "8"}, {"type": "fg_fs", "start_ref": "16", "end_ref": "31"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Drazen Šošić, James A Richardson, Kai Yu, et al. 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NCBI Gene ID 100500861
API
Download Associations
Predicted Functions View MIR3665's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR3665's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR3665's ARCHS4 Predicted Functions.

Functional Associations

MIR3665 has 886 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.

Click the + buttons to view associations for MIR3665 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3665 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3665 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR3665 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR3665 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR3665 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of MIR3665 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR3665 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR3665 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of MIR3665 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR3665 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.