| HGNC Family | Non-coding RNAs |
| Name | microRNA 4328 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent research on sporadic colorectal cancer has identified miR-4328 as a potential regulator of epidermal growth factor receptor (EGFR) expression specifically in metastatic tumors."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In these studies, miR-4328 was found to interact with EGFR in metastatic cases, suggesting that it may contribute to the upregulation of EGFR that is associated with lymph node and liver metastases as well as with advanced tumor stages and adverse clinical outcomes. This post‐transcriptional regulatory role contrasts with that of miR-134—which appears to affect EGFR in non-metastatic tumors—highlighting a context-dependent function of microRNAs in colorectal cancer.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn a separate investigation examining innate immune mechanisms through the study of the LysMD3 protein"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ", no direct involvement or functional attribution of miR-4328 was reported. This absence underlines that the regulatory function of miR-4328 may be largely tissue‐ or context-specific, with significant implications in colorectal cancer metastasis rather than in the general regulation of innate immune components.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Sofía Del Carmen, Luís Antonio Corchete, Ruth Gervas, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Prognostic implications of EGFR protein expression in sporadic colorectal tumors: Correlation with copy number status, mRNA levels and miRNA regulation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-020-61688-7"}], "href": "https://doi.org/10.1038/s41598-020-61688-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32170146"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32170146"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Christine C Yokoyama, Megan T Baldridge, Daisy W Leung, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LysMD3 is a type II membrane protein without an "}, {"type": "a", "children": [{"type": "t", "text": "b"}], "href": "b"}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "in vivo"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "a", "children": [{"type": "t", "text": "/b"}], "href": "/b"}, {"type": "t", "text": " role in the response to a range of pathogens."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.RA117.001246"}], "href": "https://doi.org/10.1074/jbc.RA117.001246"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29496999"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29496999"}]}]}]}
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| NCBI Gene ID | 100422932 |
| API | |
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| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR4328 has 160 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 8 datasets.
Click the + buttons to view associations for MIR4328 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4328 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4328 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR4328 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR4328 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MIR4328 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of MIR4328 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4328 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR4328 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |