| HGNC Family | Non-coding RNAs |
| Name | microRNA 4460 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough none of the provided abstracts mention MIR4460 directly, the collective findings offer insights into a fundamental cellular mechanism—nuclear import—that MIR4460 may well influence if it partakes in post‐transcriptional regulation. In studies of neural differentiation and viral gene expression, the selective switching and regulation of importin‐α subtypes have been shown to control the nuclear influx of key transcription factors and viral proteins. Such observations underscore the importance of regulated nuclear import in cell‐fate determination and pathogen replication, suggesting that a microRNA like MIR4460 could potentially modulate these pathways by targeting one or more components of the nuclear transport machinery."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther studies focused on the role of nuclear import in myogenesis and receptor-mediated nuclear uptake reveal that distinct importin-α paralogs are critical for cell cycle regulation, muscle fiber formation, and even receptor nuclear trafficking in osteoblasts. These findings indicate that precise modulation of nuclear localization—mediated through phosphorylation-dependent interactions and specific adaptor protein partnerships—is central to proper differentiation and cellular responsiveness. In this context, a microRNA such as MIR4460 might be envisioned to fine-tune the levels or activity of importins and other transport-related proteins in scenarios ranging from muscle regeneration to viral infection."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "4", "end_ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFinally, investigations into stress-responsive nuclear import and satellite cell function—as well as studies linking importin dysregulation to psychiatric phenotypes and alterations in nuclear localization sequence (NLS) binding—emphasize that the efficiency and selectivity of nuclear transport are pivotal for cell survival, apoptosis, and synaptic as well as behavioral outcomes. This layered regulatory system, which integrates nutrient and mitogen signals with the dynamic assembly of nuclear transport complexes, provides fertile ground for a modulatory role of MIR4460. By possibly targeting transcripts encoding import receptors or their regulators, MIR4460 could contribute to adjusted nuclear import and, by extension, influence immune modulation, apoptosis, and neuropsychiatric behavior."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "8", "end_ref": "11"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Noriko Yasuhara, Noriko Shibazaki, Shinya Tanaka, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Triggering neural differentiation of ES cells by subtype switching of importin-alpha."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Cell Biol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncb1521"}], "href": "https://doi.org/10.1038/ncb1521"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17159997"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17159997"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Christian Faul, Stefan Hüttelmaier, Jun Oh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Promotion of importin alpha-mediated nuclear import by the phosphorylation-dependent binding of cargo protein to 14-3-3."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.200411169"}], "href": "https://doi.org/10.1083/jcb.200411169"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15883195"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15883195"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Katinka Döhner, Ana Ramos-Nascimento, Dagmara Bialy, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Importin α1 is required for nuclear import of herpes simplex virus proteins and capsid assembly in fibroblasts and neurons."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS Pathog (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.ppat.1006823"}], "href": "https://doi.org/10.1371/journal.ppat.1006823"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29304174"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29304174"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Monica N Hall, Christine A Griffin, Adriana Simionescu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Distinct roles for classical nuclear import receptors in the growth of multinucleated muscle cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dev Biol (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ydbio.2011.06.032"}], "href": "https://doi.org/10.1016/j.ydbio.2011.06.032"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21741962"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21741962"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Bryce W Pickard, Anthony B Hodsman, Laurence J Fraher, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Type 1 parathyroid hormone receptor (PTH1R) nuclear trafficking: association of PTH1R with importin alpha1 and beta."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Endocrinology (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1210/en.2005-1408"}], "href": "https://doi.org/10.1210/en.2005-1408"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16574786"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16574786"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "K M Smith, Z Himiari, S Tsimbalyuk, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structural Basis for Importin-α Binding of the Human Immunodeficiency Virus Tat."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-017-01853-7"}], "href": "https://doi.org/10.1038/s41598-017-01853-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28490747"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28490747"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Nicolas Panayotis, Anton Sheinin, Shachar Y Dagan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Importin α5 Regulates Anxiety through MeCP2 and Sphingosine Kinase 1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Rep (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.celrep.2018.11.066"}], "href": "https://doi.org/10.1016/j.celrep.2018.11.066"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30540948"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30540948"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Jill A Fielhaber, Jason Tan, Kwang-Bo Joung, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Regulation of karyopherin α1 and nuclear import by mammalian target of rapamycin."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M111.246785"}], "href": "https://doi.org/10.1074/jbc.M111.246785"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22399302"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22399302"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Hyo-Jung Choo, Alicia Cutler, Franziska Rother, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Karyopherin Alpha 1 Regulates Satellite Cell Proliferation and Survival by Modulating Nuclear Import."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Stem Cells (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/stem.2467"}], "href": "https://doi.org/10.1002/stem.2467"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27434733"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27434733"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Koki Sakurai, Taichi Itou, Makiko Morita, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Effects of Importin α1/KPNA1 deletion and adolescent social isolation stress on psychiatric disorder-associated behaviors in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0258364"}], "href": "https://doi.org/10.1371/journal.pone.0258364"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34767585"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34767585"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Hamine C de Oliveira, Tainá D da Silva, Guilherme H M Salvador, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structural and calorimetric studies reveal specific determinants for the binding of a high-affinity NLS to mammalian importin-alpha."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem J (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1042/BCJ20210401"}], "href": "https://doi.org/10.1042/BCJ20210401"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34195786"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34195786"}]}]}]}
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| NCBI Gene ID | 100616325 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR4460 has 216 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.
Click the + buttons to view associations for MIR4460 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4460 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR4460 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR4460 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MIR4460 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4460 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of MIR4460 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR4460 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |