MIR4498 Gene

HGNC Family Non-coding RNAs
Name microRNA 4498
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
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They describe how the coordinated actions of NuMA, LGN, dynein/dynactin, and emerging regulators like SAPCD2 ensure correct cortical recruitment and stabilization of these proteins during asymmetric cell division. These mechanisms are critical for epithelial stratification, neural progenitor cell behavior, and tissue morphogenesis, with failures in this regulation contributing to defects in cellular differentiation."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "4", "end_ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther reports extend these insights by linking mitotic regulatory pathways with broader cellular processes such as neurogenesis, cytoskeletal dynamics, and intracellular trafficking. For instance, alterations in microtubule organization contribute to axonal growth defects in Huntington’s disease, and interactions with proteins like Galectin‐3 and BRAP2 modulate nucleocytoplasmic cargo localization. Although miRNAs—such as miR‐124—have been implicated in fine‐tuning the expression of mitotic components (e.g., NUMA1), none of the provided abstracts describe the function of MIR4498. Thus, based on the current literature, the biological role and target spectrum of MIR4498 remain undefined, and its potential involvement in regulating cytoskeletal organization or cell division processes awaits future investigation."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "8", "end_ref": "11"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "M A Sukhai, M Thomas, Y Xuan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Evidence of functional interaction between NuMA-RARalpha and RXRalpha in an in vivo model of acute promyelocytic leukemia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/onc.2008.106"}], "href": "https://doi.org/10.1038/onc.2008.106"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18408763"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18408763"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Alain D Silk, Andrew J Holland, Don W Cleveland "}, {"type": "b", "children": [{"type": "t", "text": "Requirements for NuMA in maintenance and establishment of mammalian spindle poles."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.200810091"}], "href": "https://doi.org/10.1083/jcb.200810091"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19255246"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19255246"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Annie Rousselet "}, {"type": "b", "children": [{"type": "t", "text": "Inhibiting Crm1 causes the formation of excess acentriolar spindle poles containing NuMA and B23, but does not affect centrosome numbers."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biol Cell (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1042/BC20080218"}], "href": "https://doi.org/10.1042/BC20080218"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19522705"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19522705"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Rebecca G Davies, Kylie M Wagstaff, Eileen A McLaughlin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The BRCA1-binding protein BRAP2 can act as a cytoplasmic retention factor for nuclear and nuclear envelope-localizing testicular proteins."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochim Biophys Acta (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbamcr.2013.05.015"}], "href": "https://doi.org/10.1016/j.bbamcr.2013.05.015"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23707952"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23707952"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Lindsey Seldin, Nicholas D Poulson, Henry P Foote, et al. "}, {"type": "b", "children": [{"type": "t", "text": "NuMA localization, stability, and function in spindle orientation involve 4.1 and Cdk1 interactions."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Biol Cell (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1091/mbc.E13-05-0277"}], "href": "https://doi.org/10.1091/mbc.E13-05-0277"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24109598"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24109598"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Lindsey Seldin, Andrew Muroyama, Terry Lechler "}, {"type": "b", "children": [{"type": "t", "text": "NuMA-microtubule interactions are critical for spindle orientation and the morphogenesis of diverse epidermal structures."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Elife (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7554/eLife.12504"}], "href": "https://doi.org/10.7554/eLife.12504"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26765568"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26765568"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Catherine W N Chiu, Carine Monat, Mélanie Robitaille, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SAPCD2 Controls Spindle Orientation and Asymmetric Divisions by Negatively Regulating the Gαi-LGN-NuMA Ternary Complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dev Cell (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.devcel.2015.12.016"}], "href": "https://doi.org/10.1016/j.devcel.2015.12.016"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26766442"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26766442"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Mingyue Jin, Oz Pomp, Tomoyasu Shinoda, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Katanin p80, NuMA and cytoplasmic dynein cooperate to control microtubule dynamics."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep39902"}], "href": "https://doi.org/10.1038/srep39902"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28079116"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28079116"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Jérémy Magescas, Lucie Sengmanivong, Amandine Viau, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Spindle pole cohesion requires glycosylation-mediated localization of NuMA."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-017-01614-6"}], "href": "https://doi.org/10.1038/s41598-017-01614-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28469279"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28469279"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Weiyu Ni, Chao Jiang, Yizheng Wu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CircSLC7A2 protects against osteoarthritis through inhibition of the miR-4498/TIMP3 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Prolif (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/cpr.13047"}], "href": "https://doi.org/10.1111/cpr.13047"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33960555"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33960555"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Mariacristina Capizzi, Rémi Carpentier, Eric Denarier, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Developmental defects in Huntington's disease show that axonal growth and microtubule reorganization require NUMA1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neuron (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neuron.2021.10.033"}], "href": "https://doi.org/10.1016/j.neuron.2021.10.033"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34793694"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34793694"}]}]}]}
Synonyms MIR-4498
NCBI Gene ID 100616179
API
Download Associations
Predicted Functions View MIR4498's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR4498's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR4498's ARCHS4 Predicted Functions.

Functional Associations

MIR4498 has 252 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 8 datasets.

Click the + buttons to view associations for MIR4498 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR4498 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR4498 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR4498 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR4498 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR4498 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR4498 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR4498 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR4498 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.