| HGNC Family | Non-coding RNAs |
| Name | microRNA 4505 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough the query requested a summary of MIR4505 function, none of the provided abstracts mention or examine MIR4505; instead, the corpus centers on the multifaceted roles of the matricellular glycoprotein SPARC (secreted protein, acidic and rich in cysteine). Collectively, these studies demonstrate that SPARC critically modulates cell–matrix interactions, orchestrating extracellular matrix (ECM) deposition, collagen processing, and fibril assembly. Such regulation is essential for diverse processes including synaptogenesis in the central nervous system, bone and dermal integrity, myocardial remodeling after infarction, and proper assembly of basement membranes in the lens."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional investigations reveal that SPARC modulates key intracellular signaling pathways. It influences integrin-linked kinase activity, the processing of procollagen, and TGF‑β/Smad signaling—all of which impact cellular proliferation, differentiation, and survival. These actions are evident in models ranging from fibroblast and adipocyte differentiation to fibroproliferative responses in injured tissues such as the myocardium, kidney, and ocular lens, as well as in overall ECM organization during wound healing."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "8", "end_ref": "14"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nSPARC’s contributions extend into pathological settings. In cancer, it influences tumor stroma formation, regulates vascular permeability, modulates metastatic behavior, and even impacts the immune microenvironment by affecting macrophage polarization and the migration of dendritic and Langerhans cells. Its expression is associated with alterations in ECM composition that can either suppress or promote tumor progression depending on the specific context, while in fibrotic and inflammatory conditions SPARC helps determine the extent of scarring and tissue remodeling."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "15", "end_ref": "21"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurthermore, studies addressing metabolic regulation and immune modulation indicate that SPARC interacts with signaling molecules such as AMPK to influence glucose metabolism and that its presence or absence affects inflammatory cytokine production and even leukocyte behavior. Such effects contribute to altered tissue remodeling with age and after injury, influencing outcomes in cardiac, cutaneous, and ocular systems."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "22", "end_ref": "26"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, while the assembled abstracts provide compelling evidence for SPARC’s pivotal roles in regulating ECM dynamics, cell adhesion, migration, and a range of signaling pathways critical to tissue development, homeostasis, and repair—in contexts as diverse as synaptogenesis, wound healing, fibrosis, and cancer progression—they offer no insight into a function for MIR4505. Therefore, based on the current literature provided, no conclusions can be drawn regarding the biological role or function of MIR4505.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hakan Kucukdereli, Nicola J Allen, Anthony T Lee, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Control of excitatory CNS synaptogenesis by astrocyte-secreted proteins Hevin and SPARC."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1104977108"}], "href": "https://doi.org/10.1073/pnas.1104977108"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21788491"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21788491"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Wataru Aoi, Yuji Naito, Tomohisa Takagi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A novel myokine, secreted protein acidic and rich in cysteine (SPARC), suppresses colon tumorigenesis via regular exercise."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Gut (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1136/gutjnl-2011-300776"}], "href": "https://doi.org/10.1136/gutjnl-2011-300776"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22851666"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22851666"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Amy D Bradshaw, Pauli Puolakkainen, Jayasri Dasgupta, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SPARC-null mice display abnormalities in the dermis characterized by decreased collagen fibril diameter and reduced tensile strength."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Invest Dermatol (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1046/j.1523-1747.2003.12241.x"}], "href": "https://doi.org/10.1046/j.1523-1747.2003.12241.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12787119"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12787119"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Thomas H Barker, Gretchen Baneyx, Marina Cardó-Vila, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SPARC regulates extracellular matrix organization through its modulation of integrin-linked kinase activity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M504663200"}], "href": "https://doi.org/10.1074/jbc.M504663200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16115889"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16115889"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Mark W M Schellings, Davy Vanhoutte, Melissa Swinnen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Absence of SPARC results in increased cardiac rupture and dysfunction after acute myocardial infarction."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Exp Med (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1084/jem.20081244"}], "href": "https://doi.org/10.1084/jem.20081244"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19103879"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19103879"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Sabina Sangaletti, Emma Di Carlo, Silvia Gariboldi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Macrophage-derived SPARC bridges tumor cell-extracellular matrix interactions toward metastasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Res (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/0008-5472.CAN-08-1327"}], "href": "https://doi.org/10.1158/0008-5472.CAN-08-1327"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18974151"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18974151"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Mélanie Tichet, Virginie Prod'Homme, Nina Fenouille, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tumour-derived SPARC drives vascular permeability and extravasation through endothelial VCAM1 signalling to promote metastasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncomms7993"}], "href": "https://doi.org/10.1038/ncomms7993"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25925867"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25925867"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Anne M Delany, Ivo Kalajzic, Amy D Bradshaw, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Osteonectin-null mutation compromises osteoblast formation, maturation, and survival."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Endocrinology (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1210/en.2002-221044"}], "href": "https://doi.org/10.1210/en.2002-221044"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12746322"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12746322"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Barbara J Schiemann, Jason R Neil, William P Schiemann "}, {"type": "b", "children": [{"type": "t", "text": "SPARC inhibits epithelial cell proliferation in part through stimulation of the transforming growth factor-beta-signaling system."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Biol Cell (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1091/mbc.e03-01-0001"}], "href": "https://doi.org/10.1091/mbc.e03-01-0001"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14517312"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14517312"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Tyler J Rentz, Felicitta Poobalarahi, Paul Bornstein, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SPARC regulates processing of procollagen I and collagen fibrillogenesis in dermal fibroblasts."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M700167200"}], "href": "https://doi.org/10.1074/jbc.M700167200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17522057"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17522057"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Amy D Bradshaw, Catalin F Baicu, Tyler J Rentz, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Pressure overload-induced alterations in fibrillar collagen content and myocardial diastolic function: role of secreted protein acidic and rich in cysteine (SPARC) in post-synthetic procollagen processing."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circulation (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCULATIONAHA.108.773424"}], "href": "https://doi.org/10.1161/CIRCULATIONAHA.108.773424"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19118257"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19118257"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Magali Millecamps, Maral Tajerian, Lina Naso, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Lumbar intervertebral disc degeneration associated with axial and radiating low back pain in ageing SPARC-null mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pain (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.pain.2012.01.027"}], "href": "https://doi.org/10.1016/j.pain.2012.01.027"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22414871"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22414871"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Matt S Weaver, Gail Workman, E Helene Sage "}, {"type": "b", "children": [{"type": "t", "text": "The copper binding domain of SPARC mediates cell survival in vitro via interaction with integrin beta1 and activation of integrin-linked kinase."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M706563200"}], "href": "https://doi.org/10.1074/jbc.M706563200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18503049"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18503049"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Amy D Bradshaw, Catalin F Baicu, Tyler J Rentz, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Age-dependent alterations in fibrillar collagen content and myocardial diastolic function: role of SPARC in post-synthetic procollagen processing."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Heart Circ Physiol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajpheart.00474.2009"}], "href": "https://doi.org/10.1152/ajpheart.00474.2009"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20008277"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20008277"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Maral Tajerian, Sebastian Alvarado, Magali Millecamps, et al. "}, {"type": "b", "children": [{"type": "t", "text": "DNA methylation of SPARC and chronic low back pain."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Pain (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/1744-8069-7-65"}], "href": "https://doi.org/10.1186/1744-8069-7-65"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21867537"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21867537"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Shanna A Arnold, Lee B Rivera, Andrew F Miller, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Lack of host SPARC enhances vascular function and tumor spread in an orthotopic murine model of pancreatic carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dis Model Mech (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/dmm.003228"}], "href": "https://doi.org/10.1242/dmm.003228"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20007485"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20007485"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Aleksandar Francki, Timothy D McClure, Rolf A Brekken, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SPARC regulates TGF-beta1-dependent signaling in primary glomerular mesangial cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.20008"}], "href": "https://doi.org/10.1002/jcb.20008"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15034927"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15034927"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Neveen Said, Kouros Motamed "}, {"type": "b", "children": [{"type": "t", "text": "Absence of host-secreted protein acidic and rich in cysteine (SPARC) augments peritoneal ovarian carcinomatosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Pathol (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/S0002-9440(10)61255-2"}], "href": "https://doi.org/10.1016/S0002-9440(10"}, {"type": "t", "text": "61255-2) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16314484"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16314484"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Pauli Puolakkainen, Amy D Bradshaw, Themistoklis R Kyriakides, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Compromised production of extracellular matrix in mice lacking secreted protein, acidic and rich in cysteine (SPARC) leads to a reduced foreign body reaction to implanted biomaterials."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Pathol (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/S0002-9440(10)63856-4"}], "href": "https://doi.org/10.1016/S0002-9440(10"}, {"type": "t", "text": "63856-4) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12547720"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12547720"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Miho Nozaki, Eiji Sakurai, Brian J Raisler, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of SPARC-mediated VEGFR-1 suppression after injury reveals a novel antiangiogenic activity of VEGF-A."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI26316"}], "href": "https://doi.org/10.1172/JCI26316"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16453023"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16453023"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Jun-Ling Zhang, Guo-Wei Chen, Yu-Cun Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Secreted protein acidic and rich in cysteine (SPARC) suppresses angiogenesis by down-regulating the expression of VEGF and MMP-7 in gastric cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0044618"}], "href": "https://doi.org/10.1371/journal.pone.0044618"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22957090"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22957090"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "Haiyan Song, Yuanyuan Guan, Liping Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SPARC interacts with AMPK and regulates GLUT4 expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2010.05.033"}], "href": "https://doi.org/10.1016/j.bbrc.2010.05.033"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20460104"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20460104"}]}, {"type": "r", "ref": 23, "children": [{"type": "t", "text": "Hiroe Toba, Lisandra E de Castro Brás, Catalin F Baicu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Secreted protein acidic and rich in cysteine facilitates age-related cardiac inflammation and macrophage M1 polarization."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Cell Physiol (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajpcell.00402.2014"}], "href": "https://doi.org/10.1152/ajpcell.00402.2014"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25877699"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25877699"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "Samantha M Lloyd-Burton, Elisa M York, Mohammad A Anwar, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SPARC regulates microgliosis and functional recovery following cortical ischemia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.3585-12.2013"}], "href": "https://doi.org/10.1523/JNEUROSCI.3585-12.2013"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23467362"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23467362"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Qi Yan, Matt Weaver, Nikole Perdue, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Matricellular protein SPARC is translocated to the nuclei of immortalized murine lens epithelial cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Physiol (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcp.20226"}], "href": "https://doi.org/10.1002/jcp.20226"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15534859"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15534859"}]}, {"type": "r", "ref": 26, "children": [{"type": "t", "text": "Sabina Sangaletti, Giovanna Talarico, Claudia Chiodoni, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SPARC Is a New Myeloid-Derived Suppressor Cell Marker Licensing Suppressive Activities."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Immunol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fimmu.2019.01369"}], "href": "https://doi.org/10.3389/fimmu.2019.01369"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31281314"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31281314"}]}]}]}
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| Synonyms | MIR-4505 |
| NCBI Gene ID | 100616158 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR4505 has 1,395 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.
Click the + buttons to view associations for MIR4505 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4505 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR4505 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of MIR4505 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4505 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR4505 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR4505 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MIR4505 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4505 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of MIR4505 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR4505 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |