| HGNC Family | Non-coding RNAs |
| Name | microRNA 4683 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough none of the three abstracts directly investigate MIR4683, clues from these studies suggest potential contexts in which such a microRNA might function. In one study, a loss‐of‑function variant in FAM92A disrupts ciliogenesis and proper limb patterning, leading to congenital limb abnormalities (e.g., postaxial polydactyly)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Given that many microRNAs regulate developmental genes and pathways, MIR4683 could be hypothesized to play a role in fine‑tuning gene expression during limb development or ciliogenesis.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nA second study addresses the mechanisms governing sperm flagellum compartmentalization, demonstrating that a complex involving Cby3 and ciBAR1 regulates the positioning of the annulus crucial for proper flagellum formation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Although MIR4683 is not mentioned, microRNAs are known contributors to spermatogenesis and flagellar development, raising the possibility that MIR4683 might, in a broader regulatory network, influence the expression or stability of factors involved in membrane remodeling or cytoskeletal organization.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn a third investigation, the focus is on the molecular cloning, tissue distribution, tumor distribution, and subcellular localization of the AK078438 gene."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Given that certain genes initially annotated with accession numbers have later been reclassified as microRNAs (e.g., MIR4683), this study hints at the existence of regulatory transcripts with diverse expression profiles in both normal and pathological states. Therefore, while direct functional evidence for MIR4683 is lacking in these abstracts, the reported work establishes experimental paradigms—in development, ciliogenesis, and cancer biology—where microRNAs typically exert regulatory control.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Isabelle Schrauwen, Arnaud Pj Giese, Abdul Aziz, et al. "}, {"type": "b", "children": [{"type": "t", "text": "FAM92A Underlies Nonsyndromic Postaxial Polydactyly in Humans and an Abnormal Limb and Digit Skeletal Phenotype in Mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Bone Miner Res (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jbmr.3594"}], "href": "https://doi.org/10.1002/jbmr.3594"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30395363"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30395363"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Mohammed Hoque, Feng-Qian Li, William David Weber, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Cby3/ciBAR1 complex positions the annulus along the sperm flagellum during spermiogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.202307147"}], "href": "https://doi.org/10.1083/jcb.202307147"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38197861"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38197861"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Lin Huang, Min Song, Han-shuo Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "[Cloning, expression, distribution and subcellular localization of AK078438 gene]."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Zhonghua Yi Xue Yi Chuan Xue Za Zhi (2007)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17557235"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17557235"}]}]}]}
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| NCBI Gene ID | 100616500 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR4683 has 1,058 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.
Click the + buttons to view associations for MIR4683 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4683 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR4683 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR4683 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MIR4683 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of MIR4683 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4683 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR4683 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |