| HGNC Family | Non-coding RNAs |
| Name | microRNA 4772 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nA broad range of studies has demonstrated that specificity protein 1 (Sp1) is a central transcriptional regulator that modulates diverse cellular responses in contexts such as hypoxia, inflammation, vascular remodeling, and hematopoietic specification. For instance, hypoxia‐induced upregulation of CD39—a key enzyme in inflammatory protection—is mediated through Sp1‐dependent pathways"}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": ", while Sp1 cooperates with additional factors such as KLF6 and SCL in regulating endoglin and c‐kit expression critical for vascular and hematopoietic processes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}, {"type": "fg_f", "ref": "1"}, {"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn parallel, accumulating evidence indicates that microRNAs serve as important modulators of Sp1‐dependent transcriptional programs. For example, miR‑140, known for its role in chondrogenesis, influences cell proliferation by affecting Sp1‐mediated gene activation"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": ", while other microRNAs such as miR‑7a/b and miR‑1224 have been shown to temper cellular injury or inflammatory responses by targeting Sp1 and its downstream effectors."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "6", "end_ref": "8"}]}, {"type": "t", "text": " These studies highlight how modulation of Sp1 activity by specific microRNAs contributes to fine‐tuning of gene expression in both normal development and disease.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAlthough none of the provided abstracts directly address MIR4772, the cumulative findings imply that microRNAs influencing Sp1‐dependent networks—much like miR‑140, miR‑7a/b, miR‑1224, and members of the miR‑200 family—play pivotal roles in orchestrating cellular responses. By analogy, MIR4772 may function to modulate Sp1‐centered transcriptional circuits that govern genes involved in hypoxia/inflammatory protection (e.g. CD39 and IL‑10 regulation;"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ", extracellular matrix and fibrotic responses"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": ", as well as oncogenic signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": " Moreover, studies evaluating exosomal microRNAs in colon cancer"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "15"}]}, {"type": "t", "text": "suggest that MIR4772 might hold diagnostic or prognostic significance in tumor recurrence and treatment response. Collectively, these data support the hypothesis that MIR4772, similar to other microRNAs that impact Sp1 function, may serve as an important regulatory molecule interfacing with Sp1-dependent transcriptional machinery and thereby affecting a spectrum of biological outcomes.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Eric Lécuyer, Sabine Herblot, Marianne Saint-Denis, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The SCL complex regulates c-kit expression in hematopoietic cells through functional interaction with Sp1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood-2002-02-0568"}], "href": "https://doi.org/10.1182/blood-2002-02-0568"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12239153"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12239153"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Luisa M Botella, Tilman Sánchez-Elsner, Francisco Sanz-Rodriguez, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Transcriptional activation of endoglin and transforming growth factor-beta signaling components by cooperative interaction between Sp1 and KLF6: their potential role in the response to vascular injury."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood.V100.12.4001"}], "href": "https://doi.org/10.1182/blood.V100.12.4001"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12433697"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12433697"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Holger K Eltzschig, David Köhler, Tobias Eckle, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Central role of Sp1-regulated CD39 in hypoxia/ischemia protection."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood-2008-06-165746"}], "href": "https://doi.org/10.1182/blood-2008-06-165746"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18812468"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18812468"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "T-I Hsu, M-C Wang, S-Y Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sp1 expression regulates lung tumor progression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/onc.2011.568"}], "href": "https://doi.org/10.1038/onc.2011.568"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22158040"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22158040"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Jun Yang, Shengying Qin, Chengqing Yi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MiR-140 is co-expressed with Wwp2-C transcript and activated by Sox9 to target Sp1 in maintaining the chondrocyte proliferation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FEBS Lett (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.febslet.2011.08.013"}], "href": "https://doi.org/10.1016/j.febslet.2011.08.013"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21872590"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21872590"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Yuna Niu, Delin Mo, Limei Qin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Lipopolysaccharide-induced miR-1224 negatively regulates tumour necrosis factor-α gene expression by modulating Sp1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Immunology (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1365-2567.2010.03374.x"}], "href": "https://doi.org/10.1111/j.1365-2567.2010.03374.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21320120"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21320120"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Natasha Kolesnikoff, Joanne L Attema, Suraya Roslan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Specificity protein 1 (Sp1) maintains basal epithelial expression of the miR-200 family: implications for epithelial-mesenchymal transition."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M113.529172"}], "href": "https://doi.org/10.1074/jbc.M113.529172"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24627491"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24627491"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Rui Li, Hai-Hua Geng, Jie Xiao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "miR-7a/b attenuates post-myocardial infarction remodeling and protects H9c2 cardiomyoblast against hypoxia-induced apoptosis involving Sp1 and PARP-1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep29082"}], "href": "https://doi.org/10.1038/srep29082"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27384152"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27384152"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Yi-Wen Liu, Hui-Ping Tseng, Lei-Chin Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Functional cooperation of simian virus 40 promoter factor 1 and CCAAT/enhancer-binding protein beta and delta in lipopolysaccharide-induced gene activation of IL-10 in mouse macrophages."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Immunol (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4049/jimmunol.171.2.821"}], "href": "https://doi.org/10.4049/jimmunol.171.2.821"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12847250"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12847250"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Melanie L Hart, Iris C Gorzolla, Jens Schittenhelm, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SP1-dependent induction of CD39 facilitates hepatic ischemic preconditioning."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Immunol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4049/jimmunol.0901851"}], "href": "https://doi.org/10.4049/jimmunol.0901851"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20207994"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20207994"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Larry L Luchsinger, Cassandra A Patenaude, Barbara D Smith, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Myocardin-related transcription factor-A complexes activate type I collagen expression in lung fibroblasts."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M111.276931"}], "href": "https://doi.org/10.1074/jbc.M111.276931"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22049076"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22049076"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Qianjin Zhang, Yichuan Hu, Jin-E Hu, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Hypoxia upregulates CD147 through a combined effect of HIF-1α and Sp1 to promote glycolysis and tumor progression in epithelial solid tumors."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/bgs196"}], "href": "https://doi.org/10.1093/carcin/bgs196"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22678117"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22678117"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Chang Liu, Cathy Eng, Jianjun Shen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Serum exosomal miR-4772-3p is a predictor of tumor recurrence in stage II and III colon cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncotarget (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/oncotarget.12841"}], "href": "https://doi.org/10.18632/oncotarget.12841"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27788488"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27788488"}]}]}]}
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| Synonyms | MIR-4772 |
| NCBI Gene ID | 100616157 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR4772 has 198 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.
Click the + buttons to view associations for MIR4772 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4772 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4772 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR4772 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR4772 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MIR4772 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR4772 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of MIR4772 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |