MIR509-1 Gene

HGNC Family Non-coding RNAs
Name microRNA 509-1
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent studies have highlighted the critical role of miR‐509 (primarily the 5p form) as a modulator of oncogenic networks in diverse malignancies. In renal cell carcinoma, investigation into miR‐509‑5p established its relevance in tumor biology (‑."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In cervical cancer and hepatocellular carcinoma, miR‑509‑5p is transcriptionally activated by p53 and, in turn, downregulates MDM2, thereby suppressing cell growth and invasive behaviors (‑."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In breast cancer, decreased miR‑509 expression in brain metastatic lesions correlates with dysregulation of the RhoC–TNF‑α network, which facilitates brain invasion (‑."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Moreover, early analyses in non‐small cell lung cancer (NSCLC) have begun to elucidate its involvement in modulating tumor cell properties (‑"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ", and studies in triple‑negative breast cancer further demonstrate that restoring miR‑509 levels not only inhibits proliferation and migration but also induces apoptosis through modulation of TNF‑α (‑."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurther functional studies reveal that in NSCLC miR‑509‑5p exerts tumor‐suppressive effects by targeting factors such as YWHAG, leading to reduced Akt phosphorylation and decreased cell migration and invasion (‑."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " In prostate cancer, an inverse correlation between miR‑509‑5p and MDM2 expression has been reported, supporting its role in dampening tumor aggressiveness (‑."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " In pancreatic cancer, enforced miR‑509‑5p expression suppresses the epithelial–mesenchymal transition (EMT) by upregulating E‑cadherin and downregulating EMT‑related genes, thereby enhancing chemosensitivity (‑."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " Consistent with these observations, additional studies in breast cancer have implicated miR‑509‑5p in restraining cell growth and metastasis (‑"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ", and in ovarian cancer, modulation of miR‑509‑3p affects cisplatin‐triggered apoptosis, suggesting a role in determining chemosensitivity (‑."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its mechanistic contributions to tumor suppression, miR‑509 has emerged as a promising prognostic biomarker. In pediatric acute myeloid leukemia, elevated miR‑509 levels form part of a miRNA signature that independently predicts poorer overall survival (‑."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": " In colon cancer, miR‑509‑3‑5p has been shown to interact with targets such as GTSE1, highlighting its tumor‐suppressive potential (‑."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": " In hepatocellular carcinoma, emerging data suggest that miR‑509 expression may serve as a useful diagnostic and prognostic indicator (‑"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": ", while in colorectal cancer, miR‑509‑5p is increasingly recognized for its role in modulating key oncogenic pathways (‑."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "14"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "W-B Zhang, Z-Q Pan, Q-S Yang, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Mir-509-5p joins the Mdm2/p53 feedback loop and regulates cancer cell growth."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/cddis.2014.327"}], "href": "https://doi.org/10.1038/cddis.2014.327"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25144722"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25144722"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "F Xing, S Sharma, Y Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "miR-509 suppresses brain metastasis of breast cancer cells by modulating RhoC and TNF-α."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/onc.2014.412"}], "href": "https://doi.org/10.1038/onc.2014.412"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25659578"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25659578"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Ning Ma, Weihua Zhang, Chenhui Qiao, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Expression of miR-187 and miR-509-3p in serum of primary hepatocellular carcinoma patients and its evaluation of prognosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J BUON (2021)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34564990"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34564990"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Mahmoud A Elrebehy, Tamer M Abdelghany, Mostafa M Elshafey, et al. 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Synonyms MIRN509, MIRN509-1, HSA-MIR-509, MIR-509-1
NCBI Gene ID 574514
API
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Predicted Functions View MIR509-1's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR509-1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR509-1's ARCHS4 Predicted Functions.

Functional Associations

MIR509-1 has 158 functional associations with biological entities spanning 4 categories (molecular profile, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.

Click the + buttons to view associations for MIR509-1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR509-1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR509-1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR509-1 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR509-1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR509-1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with MIR509-1 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing MIR509-1 from the GeneSigDB Published Gene Signatures dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR509-1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR509-1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR509-1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.