MIR5197 Gene

Name microRNA 5197
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nA thorough review of the 38 provided abstracts reveals that none contain any mention of MIR5197. Instead, the literature overwhelmingly focuses on the critical roles of endoplasmic reticulum–associated degradation (ERAD) and its key mediators—principally ER‐resident E3 ubiquitin ligases such as HRD1 (also known as Synoviolin) and its cofactors (e.g., Sel1L)—in maintaining protein homeostasis, modulating the unfolded protein response, and regulating processes such as apoptosis, inflammation, immune function, metabolism, and cellular stress adaptation. In these studies, HRD1‐dependent ubiquitination has been shown to govern degradation of proteins ranging from misfolded substrates to regulatory factors involved in B‑cell development, neuronal survival, and fibrogenesis, among other functions."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "38"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn light of this comprehensive body of work, the specific function of MIR5197 remains undetermined by the abstracts at hand. No experimental data, mechanistic insights, or functional annotations regarding MIR5197 were provided within these studies. Consequently, while the studies offer a detailed framework for understanding ER stress regulation and protein quality control via ubiquitin‐mediated pathways, they do not shed any light on the biological role, targets, or regulatory impact of MIR5197. Further, targeted investigations focusing on MIR5197 will be necessary to unravel whether it is implicated in any of these critical cellular processes."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "38"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Naoko Yagishita, Kinuko Ohneda, Tetsuya Amano, et al. 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NCBI Gene ID 100846991
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Predicted Functions View MIR5197's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR5197's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR5197's ARCHS4 Predicted Functions.

Functional Associations

MIR5197 has 158 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 4 datasets.

Click the + buttons to view associations for MIR5197 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR5197 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR5197 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR5197 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR5197 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.