| HGNC Family | Non-coding RNAs |
| Name | microRNA 548ae-2 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe collection of studies provided does not report any data or insights regarding the function of MIR548AE2. Instead, all four abstracts focus on the roles and regulation of Keratin 7 (K7) in various epithelial tissues under distinct physiological and pathological conditions. For example, one study characterized a K7 knockout mouse and demonstrated that loss of K7 increases urothelial proliferation in the bladder, along with tissue‐specific alterations in its partners (e.g., K18 and K20)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAnother investigation used luciferase reporter systems and transgenic mice to dissect the regulatory elements of the murine K7 promoter, establishing that key upstream sequences are required for selective expression in pancreatic ductal cells and pancreatic cancers."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nA further report extended the understanding of K7 by showing its presence in the islets of Langerhans, where K7 forms part of an intermediate filament network that is modulated by K18 levels and is markedly altered in experimental diabetes, underscoring its role in maintaining islet cellular architecture."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nLastly, research on septic lung injury revealed that phosphorylation of a unique site on K7 can provoke the disintegration of desmosomal proteins, contributing to alveolar barrier dysfunction in acute lung injury."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Collectively, while these investigations provide substantial insight into the diverse functions of Keratin 7 in epithelial biology, none of the abstracts address or elucidate the function of MIR548AE2.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Aileen Sandilands, Frances J D Smith, Declan P Lunny, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Generation and characterisation of keratin 7 (K7) knockout mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0064404"}], "href": "https://doi.org/10.1371/journal.pone.0064404"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23741325"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23741325"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Judit Pujal, Meritxell Huch, Anabel José, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Keratin 7 promoter selectively targets transgene expression to normal and neoplastic pancreatic ductal cells in vitro and in vivo."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FASEB J (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1096/fj.08-115576"}], "href": "https://doi.org/10.1096/fj.08-115576"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19124560"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19124560"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Catharina M Alam, Sarah Baghestani, Ada Pajari, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Keratin 7 Is a Constituent of the Keratin Network in Mouse Pancreatic Islets and Is Upregulated in Experimental Diabetes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Sci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ijms22157784"}], "href": "https://doi.org/10.3390/ijms22157784"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34360548"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34360548"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Qi He, Zirui Zuo, Ke Song, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Keratin7 and Desmoplakin are involved in acute lung injury induced by sepsis through RAGE."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int Immunopharmacol (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.intimp.2023.110867"}], "href": "https://doi.org/10.1016/j.intimp.2023.110867"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37660597"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37660597"}]}]}]}
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| NCBI Gene ID | 100616339 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR548AE2 has 167 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.
Click the + buttons to view associations for MIR548AE2 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR548AE2 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR548AE2 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR548AE2 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR548AE2 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MIR548AE2 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR548AE2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of MIR548AE2 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |