| HGNC Family | Non-coding RNAs |
| Name | microRNA 548h-1 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nTRPM6 is an essential magnesium‐permeable channel that critically regulates systemic Mg²⁺ homeostasis and is indispensable during early development. Studies in mice fed low‐magnesium diets have revealed that TRPM6 expression in the kidney and intestine is up‐regulated to optimize Mg²⁺ absorption and support fundamental cellular functions."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In addition, modulation of TRPM6 by the repressor of estrogen receptor activity (REA) indicates a rapid, hormone‐mediated regulatory mechanism whereby 17β-estradiol treatment enhances TRPM6‐mediated currents."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Genetic inactivation of TRPM6 in murine models results in severe developmental defects—including neural tube malformations—underscoring its central role in organogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Moreover, in mammary epithelial cells, low extracellular magnesium triggers a rapid up-regulation of TRPM6 mRNA and protein, suggesting that this channel adapts dynamically to changes in magnesium availability."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAt the molecular level, TRPM6 function is further refined by its interactions with regulatory proteins and by genetic modulation in disease models. For example, under oxidative stress conditions, the methionine sulfoxide reductase B1 (MsrB1) associates with TRPM6 to partly rescue its channel activity from hydrogen peroxide–induced inhibition"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": ", while targeted knockout studies confirm that loss of TRPM6 severely disturbs magnesium balance."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " Altered TRPM6 expression is also observed in experimental models of asthma, correlating with changes in plasma and erythrocyte magnesium levels"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": ", and in conditions of hyperaldosteronism that are associated with electrolyte imbalances."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " In the placenta, TRPM6 contributes to maternal–fetal calcium transport—a process crucial for fetal bone mineralization"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": "—and its intestinal expression is key for maintaining lifelong magnesium homeostasis, with dietary supplementation able to rescue deficiency phenotypes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurther integrative analyses illustrate the complex regulatory landscape in which TRPM6 operates. The formation of heteromeric TRPM6/TRPM7 channels fine-tunes sensitivity to physiological Mg²⁺ and Mg·ATP concentrations, ensuring robust transepithelial ion transport even under dynamic cellular conditions."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": " In addition, uromodulin (UMOD) interacts with TRPM6 to enhance its cell–surface abundance by inhibiting dynamin-dependent endocytosis, thereby contributing to renal magnesium reabsorption."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": " Finally, TRPM6 function extends to cardiovascular regulation, where its role in the augmentation of renin secretion during the active phase implicates this channel in the circadian control of blood pressure."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Lusliany J Rondón, Wouter M Tiel Groenestege, Yves Rayssiguier, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Relationship between low magnesium status and TRPM6 expression in the kidney and large intestine."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Regul Integr Comp Physiol (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajpregu.00153.2007"}], "href": "https://doi.org/10.1152/ajpregu.00153.2007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18385471"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18385471"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Gang Cao, Jenny van der Wijst, Annemiete van der Kemp, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Regulation of the epithelial Mg2+ channel TRPM6 by estrogen and the associated repressor protein of estrogen receptor activity (REA)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M808752200"}], "href": "https://doi.org/10.1074/jbc.M808752200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19329436"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19329436"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Roxanne Y Walder, Baoli Yang, John B Stokes, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mice defective in Trpm6 show embryonic mortality and neural tube defects."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddp392"}], "href": "https://doi.org/10.1093/hmg/ddp392"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19692351"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19692351"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Federica I Wolf, Valentina Trapani, Matteo Simonacci, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Modulation of TRPM6 and Na(+)/Mg(2+) exchange in mammary epithelial cells in response to variations of magnesium availability."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Physiol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcp.21961"}], "href": "https://doi.org/10.1002/jcp.21961"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19890837"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19890837"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Gang Cao, Kyu Pil Lee, Jenny van der Wijst, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Methionine sulfoxide reductase B1 (MsrB1) recovers TRPM6 channel activity during oxidative stress."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M110.103655"}], "href": "https://doi.org/10.1074/jbc.M110.103655"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20584906"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20584906"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Titia E Woudenberg-Vrenken, Arjaree Sukinta, Annemiete W van der Kemp, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Transient receptor potential melastatin 6 knockout mice are lethal whereas heterozygous deletion results in mild hypomagnesemia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nephron Physiol (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1159/000320580"}], "href": "https://doi.org/10.1159/000320580"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20814221"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20814221"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "S P Jiang, Y M Wu, S E Guo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Decreased renal mRNA expression of TRPM6 is associated with hypomagnesemia in C57BL/6 asthmatic mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2010)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21284342"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21284342"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Alvaro Yogi, Glaucia E Callera, Sarah E O'Connor, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Dysregulation of renal transient receptor potential melastatin 6/7 but not paracellin-1 in aldosterone-induced hypertension and kidney damage in a model of hereditary hypomagnesemia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Hypertens (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1097/HJH.0b013e32834786d6"}], "href": "https://doi.org/10.1097/HJH.0b013e32834786d6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21602712"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21602712"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Yoshiro Suzuki, Masaki Watanabe, Claire T Saito, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Expression of the TRPM6 in mouse placental trophoblasts; potential role in maternal-fetal calcium transport."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Physiol Sci (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12576-016-0449-0"}], "href": "https://doi.org/10.1007/s12576-016-0449-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27043350"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27043350"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Vladimir Chubanov, Silvia Ferioli, Annika Wisnowsky, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Epithelial magnesium transport by TRPM6 is essential for prenatal development and adult survival."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Elife (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7554/eLife.20914"}], "href": "https://doi.org/10.7554/eLife.20914"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27991852"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27991852"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Silvia Ferioli, Susanna Zierler, Joanna Zaißerer, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TRPM6 and TRPM7 differentially contribute to the relief of heteromeric TRPM6/7 channels from inhibition by cytosolic Mg"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "2+"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "t", "text": " and Mg·ATP."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-017-08144-1"}], "href": "https://doi.org/10.1038/s41598-017-08144-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28821869"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28821869"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Mingzhu Nie, Manjot S Bal, Jie Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Uromodulin regulates renal magnesium homeostasis through the ion channel transient receptor potential melastatin 6 (TRPM6)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.RA118.003950"}], "href": "https://doi.org/10.1074/jbc.RA118.003950"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30139743"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30139743"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Yosuke Funato, Daisuke Yamazaki, Daisuke Okuzaki, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Importance of the renal ion channel TRPM6 in the circadian secretion of renin to raise blood pressure."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-021-24063-2"}], "href": "https://doi.org/10.1038/s41467-021-24063-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34140503"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34140503"}]}]}]}
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| Synonyms | MIR548H-1, MIRN548H1 |
| NCBI Gene ID | 100313830 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR548H1 has 115 functional associations with biological entities spanning 1 categories (cell line, cell type or tissue) extracted from 2 datasets.
Click the + buttons to view associations for MIR548H1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of MIR548H1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR548H1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |