| Name | microRNA 5589 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe Mediator subunit MED12 is a pivotal component of the transcriptional machinery that integrates signals from diverse transcription factors to direct RNA polymerase II activity. In early embryogenesis and pluripotent stem cell maintenance, MED12 has been shown to interact with key factors such as Nanog, regulate developmental signaling pathways including canonical Wnt/β-catenin, and ensure proper neural tube closure and gastrulation. These studies underscore the importance of MED12 in establishing early developmental gene expression programs."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its role in embryonic development, MED12 orchestrates tissue‐specific transcriptional events. In the hematopoietic compartment, MED12 is vital for maintaining hematopoietic stem cell homeostasis by stabilizing enhancer activities, whereas in activated B cells it facilitates immunoglobulin class switch recombination through mediating long‐range chromatin contacts. Moreover, gain‐of-function mutations in MED12 have been causally linked with uterine leiomyoma formation, illuminating its involvement in genomic stability and tumorigenesis in specific cellular contexts."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "4", "end_ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nMED12 also plays critical roles in regulating adult tissue physiology and differentiation. Conditional deletion in neural and glial cells disrupts brain development and precipitates dramatic auditory deficits through degeneration of cochlear structures, while specific ablation in reproductive tissues impairs uterine and ovarian function, leading to subfertility or infertility. In parallel, combined targeting of MED12 function with BET protein inhibition reveals synthetic lethal interactions in colorectal cancer cells, and interactions with key adipogenic regulators such as PPARγ provide a mechanistic basis for its role in initiating early adipogenesis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "8", "end_ref": "13"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Antonin V Tutter, Michael P Kowalski, Gretchen A Baltus, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Role for Med12 in regulation of Nanog and Nanog target genes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M805677200"}], "href": "https://doi.org/10.1074/jbc.M805677200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19036726"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19036726"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Pedro P Rocha, Wilfrid Bleiss, Heinrich Schrewe "}, {"type": "b", "children": [{"type": "t", "text": "Mosaic expression of Med12 in female mice leads to exencephaly, spina bifida, and craniorachischisis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Birth Defects Res A Clin Mol Teratol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/bdra.20693"}], "href": "https://doi.org/10.1002/bdra.20693"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20589884"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20589884"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Pedro P Rocha, Manuela Scholze, Wilfrid Bleiss, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Med12 is essential for early mouse development and for canonical Wnt and Wnt/PCP signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Development (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/dev.053660"}], "href": "https://doi.org/10.1242/dev.053660"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20630950"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20630950"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Priya Mittal, Yong-Hyun Shin, Svetlana A Yatsenko, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Med12 gain-of-function mutation causes leiomyomas and genomic instability."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI81534"}], "href": "https://doi.org/10.1172/JCI81534"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26193636"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26193636"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Anne-Sophie Thomas-Claudepierre, Isabelle Robert, Pedro P Rocha, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mediator facilitates transcriptional activation and dynamic long-range contacts at the IgH locus during class switch recombination."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Exp Med (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1084/jem.20141967"}], "href": "https://doi.org/10.1084/jem.20141967"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26903242"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26903242"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Thaleia Papadopoulou, Aysegül Kaymak, Sergi Sayols, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Dual role of Med12 in PRC1-dependent gene repression and ncRNA-mediated transcriptional activation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Cycle (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/15384101.2016.1175797"}], "href": "https://doi.org/10.1080/15384101.2016.1175797"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27096886"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27096886"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Beatriz Aranda-Orgilles, Ricardo Saldaña-Meyer, Eric Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MED12 Regulates HSC-Specific Enhancers Independently of Mediator Kinase Activity to Control Hematopoiesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Stem Cell (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.stem.2016.08.004"}], "href": "https://doi.org/10.1016/j.stem.2016.08.004"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27570068"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27570068"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Nam Hee Kim, Carolina B Livi, P Renee Yew, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mediator subunit Med12 contributes to the maintenance of neural stem cell identity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Dev Biol (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12861-016-0114-0"}], "href": "https://doi.org/10.1186/s12861-016-0114-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27188461"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27188461"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Xinye Wang, Priya Mittal, Carlos A Castro, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Med12 regulates ovarian steroidogenesis, uterine development and maternal effects in the mammalian egg."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biol Reprod (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/biolre/iox143"}], "href": "https://doi.org/10.1093/biolre/iox143"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29126187"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29126187"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Teng-Wei Huang, Amrita A Iyer, Jeanne M Manalo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Glial-Specific Deletion of Med12 Results in Rapid Hearing Loss via Degradation of the Stria Vascularis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.0070-21.2021"}], "href": "https://doi.org/10.1523/JNEUROSCI.0070-21.2021"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34253626"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34253626"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Dhanya Sooraj, Claire Sun, Anh Doan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MED12 and BRD4 cooperate to sustain cancer growth upon loss of mediator kinase."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2021.11.015"}], "href": "https://doi.org/10.1016/j.molcel.2021.11.015"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34910943"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34910943"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Sree Venigalla, Joseph Straub, Onyekachi Idigo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MED12 Regulates Human Adipose-Derived Stem Cell Adipogenesis and Mediator Kinase Subunit Expression in Murine Adipose Depots."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Stem Cells Dev (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1089/scd.2021.0302"}], "href": "https://doi.org/10.1089/scd.2021.0302"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35018809"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35018809"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Mariko Okada, Mitsuaki Fujimoto, Pratibha Srivastava, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Mediator subunit MED12 promotes formation of HSF1 condensates on heat shock response element arrays in heat-shocked cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FEBS Lett (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/1873-3468.14617"}], "href": "https://doi.org/10.1002/1873-3468.14617"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36971000"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36971000"}]}]}]}
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| NCBI Gene ID | 100847093 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR5589 has 106 functional associations with biological entities spanning 1 categories (cell line, cell type or tissue) extracted from 1 datasets.
Click the + buttons to view associations for MIR5589 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR5589 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |