| Name | microRNA 5693 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent advances in understanding Eph receptor and ephrin ligand signaling suggest that MIR5693 may act as a post‐transcriptional regulator modulating these pathways. In developmental contexts, Eph–ephrin interactions are critical for axon guidance and fasciculation – such as ephrin‐B1 regulating peripheral nerve fasciculation via repulsive signaling mediated by EphB2 – and for dynamic regulation of cell migratory behaviors as observed in the primitive streak and early mesoderm."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn neural stem/progenitor cells and in pathological conditions of the central nervous system, components of Eph signaling—including EphA receptors functioning in concert with FGFRs—help fine-tune self-renewal versus differentiation, as well as regulate neuroinflammation. Likewise, EphA1 has been implicated in modulating neuroinflammatory cascades and diabetic renal fibrosis via downstream effectors such as MAPK, Rho/ROCK and CXCL12/CXCR4 signaling."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "3", "end_ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition, EphA1 has emerged as a key player in models of neuropathic pain—where its modulation affects pro-inflammatory signaling via the CXCR4/RhoA/ROCK2 pathway—and in oncogenic contexts where its aberrant nuclear localization may contribute to tumor progression. These multifaceted roles hint that MIR5693, if acting to regulate Eph receptor expression or signaling fidelity, could influence diverse outcomes ranging from neural circuit formation and inflammatory responses to pain modulation and tumorigenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Shannon L Duffy, Kirsten A Steiner, Patrick P L Tam, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Expression analysis of the Epha1 receptor tyrosine kinase and its high-affinity ligands Efna1 and Efna3 during early mouse development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Gene Expr Patterns (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.modgep.2005.12.007"}], "href": "https://doi.org/10.1016/j.modgep.2005.12.007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16466970"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16466970"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Maëva Luxey, Thomas Jungas, Julien Laussu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Eph:ephrin-B1 forward signaling controls fasciculation of sensory and motor axons."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dev Biol (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ydbio.2013.09.010"}], "href": "https://doi.org/10.1016/j.ydbio.2013.09.010"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24056079"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24056079"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Takahiro Sawada, Daiki Arai, Xuefeng Jing, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Trans-Activation between EphA and FGFR Regulates Self-Renewal and Differentiation of Mouse Embryonic Neural Stem/Progenitor Cells via Differential Activation of FRS2α."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0128826"}], "href": "https://doi.org/10.1371/journal.pone.0128826"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26024354"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26024354"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Yihui Li, Hongdan Yan, Feng Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Activation of EphA1-Epha receptor axis attenuates diabetic nephropathy in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2017.03.100"}], "href": "https://doi.org/10.1016/j.bbrc.2017.03.100"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28341121"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28341121"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Jianjun Ma, Zhidong Wang, Siyuan Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "EphA1 Activation Induces Neuropathological Changes in a Mouse Model of Parkinson's Disease Through the CXCL12/CXCR4 Signaling Pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Neurobiol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12035-020-02122-x"}], "href": "https://doi.org/10.1007/s12035-020-02122-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33057926"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33057926"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Ronnie LaCombe, Alessandra Cecchini, Morgan Seibert, et al. "}, {"type": "b", "children": [{"type": "t", "text": "EphA1 receptor tyrosine kinase is localized to the nucleus in rhabdomyosarcoma from multiple species."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biol Open (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/bio.059352"}], "href": "https://doi.org/10.1242/bio.059352"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36214254"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36214254"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Qi Li, Rui Li, Xiaoxi Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "EphA1 aggravates neuropathic pain by activating CXCR4/RhoA/ROCK2 pathway in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Cell (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s13577-023-00911-9"}], "href": "https://doi.org/10.1007/s13577-023-00911-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37162645"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37162645"}]}]}]}
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| NCBI Gene ID | 100847003 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR5693 has 161 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 4 datasets.
Click the + buttons to view associations for MIR5693 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR5693 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR5693 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR5693 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of MIR5693 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |