| HGNC Family | Non-coding RNAs |
| Name | microRNA 589 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nMicroRNA‐589 (including its 3p and 5p isoforms) exerts context‐dependent regulatory effects on cell proliferation, migration, invasion, and epithelial–mesenchymal transition in cancers. In glioblastoma, for example, nearly complete editing of miR‐589‑3p in the normal brain is lost in tumor tissue; the edited version suppresses glioblastoma cell proliferation, migration, and invasion by retargeting from a tumor‐suppressor (PCDH9) to a pro‐invasion factor (ADAM12), whereas the unedited form exerts oncogenic effects."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In hepatocellular carcinoma, two separate studies report that miR‐589‑5p is upregulated and functions to promote cancer stem cell characteristics, chemoresistance, and cell proliferation by targeting negative regulators of STAT3 signaling and MIG‑6."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Conversely, in prostate and endometrial cancers, miR‑589‑5p is downregulated, and its overexpression inhibits cell viability, migration, and invasion by targeting genes such as CCL5 and TRIP6."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Moreover, in breast cancer, a long noncoding RNA (TINCR) acts as a sponge to sequester miR‑589‑3p, thereby upregulating IGF1R/AKT signaling to promote tumor progression"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ", while in triple negative breast cancer a miR‑589‑5p/HDAC3 axis has been implicated in modulating oncogenic cell development."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional evidence supports roles for miR‑589‑5p in regulating histone deacetylase–dependent and cytoskeletal pathways. In non‐small cell lung cancer, miR‑589‑5p reduces HDAC5 expression through direct targeting of its 3′‑UTR, thereby impacting cell cycle control and epithelial–mesenchymal transition."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " In gastric cancer, sponging of miR‑589‑5p by circCASP9 leads to dysregulation of KANK1 and promotes malignant cell behaviors."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": " In the context of fibrotic and degenerative diseases, miR‑589 modulates TGF‑β1–induced EMT in peritoneal mesothelial cells"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": ", and bioinformatics profiling in intervertebral disc degeneration has identified miR‑589 as a pivotal regulator interacting with pathways involving SMAD4 and cell cycle genes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOutside of oncogenesis, miR‑589‑5p is involved in modulating oxidative stress and cellular injury. In neuronal cells exposed to hydrogen peroxide, decreased levels of the circular RNA circPRKCI result in accumulated miR‑589‑5p, which in turn reduces expression of the transcription factor E2F7 and contributes to cytotoxicity."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": " Similarly, in brain microvascular endothelial cells, overexpression of circ_0003423 alleviates ox‑LDL–induced injury by sponging miR‑589‑5p, thereby restoring TET2 levels."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": " In diabetic retinopathy, upregulation of circ‑UBAP2 under high‐glucose conditions sequesters miR‑589‑5p, which leads to increased expression of EGR1 and enhanced oxidative stress and vascular dysfunction."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "14"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Valeriana Cesarini, Domenico A Silvestris, Valentina Tassinari, et al. "}, {"type": "b", "children": [{"type": "t", "text": "ADAR2/miR-589-3p axis controls glioblastoma cell migration/invasion."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gkx1257"}], "href": "https://doi.org/10.1093/nar/gkx1257"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29267965"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29267965"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Jianting Long, Chunlin Jiang, Baoxian Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Maintenance of stemness by miR-589-5p in hepatocellular carcinoma cells promotes chemoresistance via STAT3 signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Lett (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.canlet.2017.11.031"}], "href": "https://doi.org/10.1016/j.canlet.2017.11.031"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29196128"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29196128"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "M Xu, Y Wang, H T He, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MiR-589-5p is a potential prognostic marker of hepatocellular carcinoma and regulates tumor cell growth by targeting MIG-6."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neoplasma (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4149/neo_2018_171125N762"}], "href": "https://doi.org/10.4149/neo_2018_171125N762"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30249105"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30249105"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Lu Ji, Xi Jiang, Fei Mao, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "miR‑589‑3p sponged by the lncRNA TINCR inhibits the proliferation, migration and invasion and promotes the apoptosis of breast cancer cells by suppressing the Akt pathway via IGF1R."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Med (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/ijmm.2020.4666"}], "href": "https://doi.org/10.3892/ijmm.2020.4666"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32705168"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32705168"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Rezgar Rahbari, Karim Rahimi, Yousef Rasmi, et al. 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| Synonyms | MIRN589, HSA-MIR-589, MIR-589 |
| NCBI Gene ID | 693174 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR589 has 983 functional associations with biological entities spanning 4 categories (molecular profile, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 17 datasets.
Click the + buttons to view associations for MIR589 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR589 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR589 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of MIR589 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR589 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR589 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR589 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MIR589 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GeneRIF Biological Term Annotations | biological terms co-occuring with MIR589 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing MIR589 from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of MIR589 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of MIR589 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of MIR589 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR589 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of MIR589 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of MIR589 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of MIR589 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR589 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |