MIR590 Gene

HGNC Family Non-coding RNAs
Name microRNA 590
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nmiR‐590, encompassing both its ‐5p and ‐3p strands, is emerging as a multifaceted regulator in diverse pathological conditions. In several studies, its dysregulated expression has been implicated in modulating cell proliferation, apoptosis, migration and invasion. For example, in some models of neurodegeneration and Alzheimer’s disease, altered miR‐590‐3p expression was correlated with changes in RNA‐binding proteins (e.g., hnRNP‐A1) (see"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", while in hepatocellular carcinoma, miR‐590‐5p has been shown to control oncogenic signals by influencing the expression of factors such as Wnt5a, c‐Myc and cyclin D1."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Studies in cervical cancer models revealed that miR‐590‐5p can act as an oncogene by post‐transcriptionally suppressing tumor suppressor CHL1"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ", and in cardiovascular contexts, miR‐590 has been linked to the regulation of lipid metabolism via modulation of macrophage‐derived LPL."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the realm of cancer biology, miR‐590 functions in a context‐dependent manner. In colorectal cancer, for instance, an increase in miR‐590‐5p expression—induced by cell–cell contact or hypoxic conditions—has been associated with reduced YAP1 levels and inhibition of tumorigenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " In glioblastoma and other highly aggressive tumors, miR‐590‐3p exerts tumor‐suppressive effects by targeting critical transcription factors such as ZEB1 and ZEB2, thereby inhibiting epithelial–mesenchymal transition (EMT)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " Conversely, in endothelial cells exposed to oxidized LDL, miR‐590‐5p has been shown to interfere with apoptosis and downstream redox–MAPK–NF‐κB signaling"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ", while its roles in osteoblast differentiation and skeletal biology are mediated through targeting inhibitors like Smad7, ultimately stabilizing Runx2."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " In colorectal and other malignancies, manipulation of miR‐590‐5p affects angiogenesis and metastasis via the NF90/VEGFA axis"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": ", with additional studies in colon cancer and hypoxia highlighting its dualistic roles."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": " In osteosarcoma, enforced miR‐590‐3p expression suppresses proliferation and invasion by directly targeting oncogenic SOX9"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "14"}]}, {"type": "t", "text": ", and in renal cell carcinoma, miR‐590‐5p functions as an oncomir by downregulating tumor‐suppressive PBRM1."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "15"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional work in ovarian and gastric cancers has revealed that miR‐590‐3p can promote tumor development by targeting regulators such as FOXA2, cyclin G2 and FOXO3—modulating downstream factors like versican and β‐catenin signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "16"}]}, {"type": "t", "text": " In esophageal squamous cell carcinoma, loss of miR‐590‐3p activity, often due to its sequestration by oncogenic lncRNAs (for example, lncRNA‐ATB), has been linked to enhanced metastatic behavior mediated through upregulation of YAP1."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "17"}]}, {"type": "t", "text": " In breast cancer, miR‐590‐3p overexpression contributes to apoptosis by targeting factors such as ATF3 and modulating Runx2 levels"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "18"}]}, {"type": "t", "text": ", whereas in gastric cancer, miR‐590‐5p directly targets FGF18 to attenuate tumorigenic signals."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "19"}]}, {"type": "t", "text": " Moreover, in models of chemoresistance and Hippo signaling—though less defined—the interplay of miR‐590 with key regulatory pathways has been suggested"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "20"}]}, {"type": "t", "text": ", and similar tumor‐suppressive roles of miR‐590‐3p have been observed in hepatocellular carcinoma through targeting critical transcriptional activators"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "21"}]}, {"type": "t", "text": "as well as in breast cancer via modulation of SIRT1 and p53 signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "22"}]}, {"type": "t", "text": " Furthermore, in bladder cancer settings, regulatory networks involving miR‐590 appear to intersect with novel non-coding RNA molecules"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "23"}]}, {"type": "t", "text": ", and in ovarian cancer, miR‐590‐3p fosters an aggressive phenotype by directly repressing CCNG2 and FOXO3."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "24"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond oncology, miR‐590’s impact has been extended to other vital physiological processes. In cardiac biology, miR‐590‐5p levels inversely correlate with differentiation cues in cardiosphere‐derived cells, suggesting an inhibitory role in cardiomyocyte maturation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "25"}]}, {"type": "t", "text": " In non‐small cell lung cancer, miR‐590‐5p exhibits tumor‐suppressive functions by targeting STAT3 and associated pro‐tumorigenic pathways"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "26"}]}, {"type": "t", "text": ", and in cardiac fibroblasts its modulation of ZEB1 underlies anti‐fibrotic and anti‐migratory effects."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "27"}]}, {"type": "t", "text": " Moreover, in inflammatory conditions such as rheumatoid arthritis, aberrant sponging of miR‐590‐5p by lincRNAs leads to activation of MAPK signaling cascades"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "28"}]}, {"type": "t", "text": ", while in esophageal squamous cell carcinoma, lncRNA ESCCAL‐1 sequesters miR‐590‐3p to derepress APOBEC3G expression and promote malignant progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "29"}]}, {"type": "t", "text": " Finally, in non‐small cell lung cancer models, circular RNAs such as circPUM1 functionally sponge miR‐590‐5p to upregulate METTL3 and bolster tumor growth and glycolysis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "30"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Chiara Villa, Chiara Fenoglio, Milena De Riz, et al. 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Synonyms MIR-590, HSA-MIR-590, MIRN590
NCBI Gene ID 693175
API
Download Associations
Predicted Functions View MIR590's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR590's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR590's ARCHS4 Predicted Functions.

Functional Associations

MIR590 has 597 functional associations with biological entities spanning 4 categories (molecular profile, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 16 datasets.

Click the + buttons to view associations for MIR590 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR590 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR590 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of MIR590 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR590 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR590 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR590 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR590 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with MIR590 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing MIR590 from the GeneSigDB Published Gene Signatures dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of MIR590 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of MIR590 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR590 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR590 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of MIR590 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR590 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR590 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.