MIR596 Gene

HGNC Family Non-coding RNAs
Name microRNA 596
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nmiR-596 has emerged as a potent tumor‐suppressive microRNA in several malignancies. In oral squamous cell carcinoma (OSCC), miR-596 is frequently silenced by promoter hypermethylation, leading to the overexpression of its direct target LGALS3BP. Restoration of miR-596 not only suppresses LGALS3BP levels but also results in reduced ERK1/2 phosphorylation, thereby inhibiting cell growth and triggering apoptosis. These findings underscore its potential as a candidate for miRNA replacement anticancer therapy."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its role in OSCC, miR-596 has been shown to function as a key inducer of apoptosis in mammalian cells via p53 regulation. By directly targeting the E3 ligase Smurf1, miR-596 indirectly stabilizes p53—normally attenuated by MDM2—ultimately promoting apoptotic cell death. This mechanism contributes to reduced cell migration and proliferation, which correlates with improved overall survival in cancer patients."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn melanoma, overexpression of miR-596 significantly inhibits the MAPK/ERK signaling pathway through direct targeting of MEK1, as well as anti-apoptotic proteins MCL1 and BCL2L1. These actions not only curb cell proliferation, migration, and invasion but also enhance apoptotic rates, demonstrating its critical value as both a prognostic factor and a therapeutic candidate in melanoma management."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nSimilarly, in gastric cancer, miR-596 acts as a tumor suppressor by regulating the expression of peroxiredoxin 1 (PRDX1). Its downregulation—often linked to increased promoter methylation—is associated with gastric tumorigenesis, suggesting that restoring miR-596 levels may counteract cancer progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nEmerging evidence also points to a potential diagnostic role for miR-596 in non-traumatic osteonecrosis of the femoral head, although the precise mechanisms by which it operates in this condition remain to be elucidated."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn prostatic cancer, while the detailed biological mechanisms of miR-596 remain under investigation, preliminary studies indicate that it may play a tumor-suppressive role similar to that observed in other cancer types, representing a promising avenue for future research."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurthermore, in the context of gastric cancer, recent studies have unveiled a novel regulatory axis in which exosomal circPRRX1 functions as a competing endogenous RNA that sequesters miR-596. This sponging effect modulates the expression of NF-κB activating protein (NKAP), thereby influencing tumorigenesis and cellular sensitivity to radiation therapy."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn glioma, miR-596 directly targets oncogenic factors such as CREPT, leading to the attenuation of Wnt/β-catenin signaling. This results in reduced cellular proliferation and invasion, further establishing miR-596 as a key negative regulator of tumor progression across multiple cancer types."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hironori Endo, Tomoki Muramatsu, Mayuko Furuta, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Potential of tumor-suppressive miR-596 targeting LGALS3BP as a therapeutic agent in oral cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/bgs376"}], "href": "https://doi.org/10.1093/carcin/bgs376"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23233740"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23233740"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Hui Li "}, {"type": "b", "children": [{"type": "t", "text": "Exploration of Alternative Mechanism for MiR-596-mediated Down-regulation of LGALS3BP in Oral Squamous Cell Carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Kokubyo Gakkai Zasshi (2015)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26502662"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26502662"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Ming Ma, Junyu Yang, Bolun Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "High-Throughput Identification of miR-596 Inducing p53-Mediated Apoptosis in HeLa and HCT116 Cells Using Cell Microarray."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "SLAS Technol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1177/2472630317720870"}], "href": "https://doi.org/10.1177/2472630317720870"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28732184"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28732184"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Szu-Mam Liu, Chen-Huan Lin, Jean Lu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "miR-596 Modulates Melanoma Growth by Regulating Cell Survival and Death."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Invest Dermatol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jid.2017.11.016"}], "href": "https://doi.org/10.1016/j.jid.2017.11.016"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29183729"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29183729"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Zhen Zhang, Dong-Qiu Dai "}, {"type": "b", "children": [{"type": "t", "text": "MicroRNA-596 acts as a tumor suppressor in gastric cancer and is upregulated by promotor demethylation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "World J Gastroenterol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3748/wjg.v25.i10.1224"}], "href": "https://doi.org/10.3748/wjg.v25.i10.1224"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30886505"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30886505"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Ligong Fu, Huawei Liu, Weijun Lei "}, {"type": "b", "children": [{"type": "t", "text": "MiR-596 inhibits osteoblastic differentiation and cell proliferation by targeting Smad3 in steroid-induced osteonecrosis of femoral head."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Orthop Surg Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13018-020-01688-5"}], "href": "https://doi.org/10.1186/s13018-020-01688-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32410637"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32410637"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "J Dai, G Yuan, Y Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MicroRNA-596 is epigenetically inactivated and suppresses prostatic cancer cell growth and migration via regulating Wnt/β-catenin signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Transl Oncol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12094-020-02536-y"}], "href": "https://doi.org/10.1007/s12094-020-02536-y"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33387246"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33387246"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Yuxin He, Liangjian Zheng, Mengzhen Yuan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Exosomal circPRRX1 functions as a ceRNA for miR-596 to promote the proliferation, migration, invasion, and reduce radiation sensitivity of gastric cancer cells via the upregulation of NF-κB activating protein."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Anticancer Drugs (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1097/CAD.0000000000001358"}], "href": "https://doi.org/10.1097/CAD.0000000000001358"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36206097"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36206097"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Minghao Wei, Yidong Cao, Dong Jia, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CREPT promotes glioma cell proliferation and invasion by activating Wnt/β-catenin pathway and is a novel target of microRNA-596."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochimie (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.biochi.2019.04.014"}], "href": "https://doi.org/10.1016/j.biochi.2019.04.014"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30995540"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30995540"}]}]}]}
Synonyms HSA-MIR-596, MIRN596
NCBI Gene ID 693181
API
Download Associations
Predicted Functions View MIR596's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR596's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR596's ARCHS4 Predicted Functions.

Functional Associations

MIR596 has 462 functional associations with biological entities spanning 4 categories (molecular profile, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.

Click the + buttons to view associations for MIR596 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR596 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR596 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of MIR596 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR596 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR596 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR596 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR596 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with MIR596 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing MIR596 from the GeneSigDB Published Gene Signatures dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR596 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR596 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of MIR596 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR596 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.