MIR599 Gene

HGNC Family Non-coding RNAs
Name microRNA 599
Description microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Summary
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In papillary thyroid carcinoma, for example, its downregulation leads to upregulation of the Hey2 gene and activation of the Notch signaling pathway, thereby promoting proliferation, migration, invasion, and epithelial–mesenchymal transition while inhibiting apoptosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In osteosarcoma, miR‐599 directly binds TGFB2, with its overexpression reversing the enhanced proliferative and migratory capabilities driven by circ‑0000285."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Similar tumor‐suppressive functions have been reported in bladder cancer, where miR‐599 targets YAP1 as well as modulates the TOP2A axis to inhibit cell proliferation and invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " In breast cancer, two independent studies have demonstrated that miR‑599 targets E2F3 or BRD4—thereby interfering with oncogenic pathways such as Jagged1/Notch1—to diminish proliferation, migration, invasion, and glycolysis while promoting apoptosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Finally, altered miR‑599 expression in cervical cancer has been correlated with prognosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond oncogenesis, miR‑599 plays important roles in non‐malignant conditions. In Parkinson’s disease, it targets LRRK2, suggesting a potential inhibitory effect on disease progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " In patients with ischemic stroke, altered serum levels of miR‑599 correlate with inflammatory markers such as hs‑CRP and MMP‑9."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": " In vascular contexts, miR‑599 overexpression protects endothelial cells from lipopolysaccharide‑induced apoptosis and inflammation by downregulating ROCK1 and blunting JAK2/STAT3 signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " In osteoarthritis, miR‑599 targets Casz1, thereby promoting chondrocyte apoptosis and inflammation—a process that is mitigated by circANKRD36 sponging of miR‑599."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": " Moreover, regulation of miR‑599 has been implicated in cell heterogeneity and endothelial–mesenchymal transition in aortic valve stromal cells via the TGF‑β pathway"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": ", and circ_0000285‐mediated modulation of miR‑599 may influence vascular smooth muscle cell injury in abdominal aortic aneurysm."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": " In addition, genetic studies in patients with cirrhosis have begun to explore how related regulatory networks might impact acute kidney injury."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "14"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Duo-Ping Wang, Xiao-Zhun Tang, Quan-Kun Liang, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Hsa-miR-599 inhibits breast cancer progression via BRD4/Jagged1/Notch1 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Physiol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcp.30548"}], "href": "https://doi.org/10.1002/jcp.30548"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34415065"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34415065"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Wen-Hui Huang, Qing Yang, Chuan Zhang "}, {"type": "b", "children": [{"type": "t", "text": "eIF4A3-induced circWAC promotes breast cancer progression through mediating miR-599/E2F3 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Kaohsiung J Med Sci (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/kjm2.12496"}], "href": "https://doi.org/10.1002/kjm2.12496"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34989110"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34989110"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Yu-Feng Gong, Yu Zhang, Li-Yang Li, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Serum miR-599 Serves as a Biomarker for Ischemic Stroke Patients."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Lab (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7754/Clin.Lab.2019.181256"}], "href": "https://doi.org/10.7754/Clin.Lab.2019.181256"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31307174"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31307174"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Jia Wang, Aolin Du, Hexilin Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MiR-599 regulates LPS-mediated apoptosis and inflammatory responses through the JAK2/STAT3 signalling pathway via targeting ROCK1 in human umbilical vein endothelial cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Exp Pharmacol Physiol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/1440-1681.13316"}], "href": "https://doi.org/10.1111/1440-1681.13316"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32248560"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32248560"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Jian-Lin Zhou, Shuang Deng, Hong-Song Fang, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Hsa_circ_0000285-Mediated miR-599/RGS17 Axis Participates in the Pathogenesis of Abdominal Aortic Aneurysm by Regulating the Functions of Vascular Smooth Muscle Cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Clin Lab Sci (2023)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37094862"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37094862"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Fangfang Zhou, Yixin Chen, Youjun Xu, et al. 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Synonyms MIRN599, HSA-MIR-599
NCBI Gene ID 693184
API
Download Associations
Predicted Functions View MIR599's ARCHS4 Predicted Functions.
Co-expressed Genes View MIR599's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MIR599's ARCHS4 Predicted Functions.

Functional Associations

MIR599 has 240 functional associations with biological entities spanning 4 categories (molecular profile, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 14 datasets.

Click the + buttons to view associations for MIR599 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR599 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR599 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of MIR599 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR599 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR599 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR599 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of MIR599 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of MIR599 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of MIR599 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of MIR599 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of MIR599 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of MIR599 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of MIR599 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at MIR599 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.