| HGNC Family | Non-coding RNAs |
| Name | microRNA 6085 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nA careful review of the provided abstracts reveals a predominant focus on the EXT gene family—particularly EXT1 and EXT2—and their essential roles in heparan sulfate (HS) biosynthesis, skeletal and neural development, and the modulation of key signaling pathways. For example, studies have shown that loss or reduced dosage of EXT enzymes disrupts proper HS chain formation, leading to developmental abnormalities including aberrant cartilage differentiation and exostosis formation."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional research has illuminated how EXT expression influences HS structure via interactions with other biosynthetic enzymes—for instance, alterations in EXT1/EXT2 levels modulate NDST1 activity and the overall sulfation pattern of HS, with consequent effects on factor responsiveness and tissue morphogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Moreover, regulatory inputs involving post‐transcriptional mechanisms emerge as important modulators of HS synthesis; one study demonstrated that the microRNA let‐7b suppresses EXT2 translation by interfering with initiation codon recognition—a regulation that is itself counteracted by polyamines during aging skin."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " Meanwhile, diverse in vivo models continue to confirm that precise EXT expression levels—and by extension, proper HS chain length—are critical for endothelial function and bone formation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nNotably, however, none of the abstracts specifically mention or describe the function of MIR6085. Although the mechanisms detailed—such as microRNA‐mediated regulation of EXT2 translation via let‐7b—provide useful paradigms for how small noncoding RNAs can fine‐tune HS biosynthesis and related signaling, they do not address MIR6085. Thus, while one might speculate that MIR6085 could act in a similar regulatory capacity over components of the HS biosynthetic machinery, its precise molecular targets and functional contributions remain undefined based on the current abstracts.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Ko-ichi Morimoto, Takahiko Shimizu, Kiyoshi Furukawa, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Transgenic expression of the EXT2 gene in developing chondrocytes enhances the synthesis of heparan sulfate and bone formation in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1006/bbrc.2002.6770"}], "href": "https://doi.org/10.1006/bbrc.2002.6770"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11944914"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11944914"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Masaru Inatani, Yu Yamaguchi "}, {"type": "b", "children": [{"type": "t", "text": "Gene expression of EXT1 and EXT2 during mouse brain development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain Res Dev Brain Res (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/s0165-3806(03)00010-5"}], "href": "https://doi.org/10.1016/s0165-3806(03"}, {"type": "t", "text": "00010-5) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12644256"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12644256"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Dominique Stickens, Beverly M Zak, Nathalie Rougier, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mice deficient in Ext2 lack heparan sulfate and develop exostoses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Development (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/dev.02088"}], "href": "https://doi.org/10.1242/dev.02088"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16236767"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16236767"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Jenny Presto, Maria Thuveson, Pernilla Carlsson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Heparan sulfate biosynthesis enzymes EXT1 and EXT2 affect NDST1 expression and heparan sulfate sulfation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0705807105"}], "href": "https://doi.org/10.1073/pnas.0705807105"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18337501"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18337501"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Beverly M Zak, Manuela Schuksz, Eiki Koyama, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Compound heterozygous loss of Ext1 and Ext2 is sufficient for formation of multiple exostoses in mouse ribs and long bones."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bone (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bone.2011.02.001"}], "href": "https://doi.org/10.1016/j.bone.2011.02.001"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21310272"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21310272"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Masataka Imamura, Kyohei Higashi, Katsutoshi Yamaguchi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Polyamines release the let-7b-mediated suppression of initiation codon recognition during the protein synthesis of EXT2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep33549"}], "href": "https://doi.org/10.1038/srep33549"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27650265"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27650265"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "H L Mooij, P Cabrales, S J Bernelot Moens, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of function in heparan sulfate elongation genes EXT1 and EXT 2 results in improved nitric oxide bioavailability and endothelial function."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Am Heart Assoc (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/JAHA.114.001274"}], "href": "https://doi.org/10.1161/JAHA.114.001274"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25468659"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25468659"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Wei Guo, Henk Roelink "}, {"type": "b", "children": [{"type": "t", "text": "Loss of the Heparan Sulfate Proteoglycan Glypican5 Facilitates Long-Range Sonic Hedgehog Signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Stem Cells (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/stem.3018"}], "href": "https://doi.org/10.1002/stem.3018"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30977233"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30977233"}]}]}]}
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| Synonyms | HSA-MIR-6085 |
| NCBI Gene ID | 102464834 |
| API | |
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| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR6085 has 0 functional associations with biological entities spanning 0 categories () extracted from 0 datasets.
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If available, associations are ranked by standardized value
| Dataset | Summary |
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