| HGNC Family | Non-coding RNAs |
| Name | microRNA 613 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nMiR‑613 is emerging as a key tumor‐suppressive microRNA that is frequently downregulated in diverse malignancies. Reduced miR‑613 expression has been correlated with poor differentiation, advanced tumor stage, metastasis and worse survival in cancers including pancreatic, thyroid, retinoblastoma, non‑small cell lung, osteosarcoma, colorectal, renal cell and others. Functionally, miR‑613 exerts its anti‑tumor effects by targeting a spectrum of oncogenes—such as Notch3, liver X receptor α, sphingosine kinase 2, Daam1, CDK9, E2F5, KRAS, Fzd7, DCLK1, VEGFA, arginase‑2 and AXL—which results in inhibited proliferation, migration, invasion and angiogenesis while promoting cell cycle arrest and apoptosis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "21"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nA complex network of long non‑coding RNAs and circular RNAs modulates the bioactivity of miR‑613 by acting as competing endogenous RNAs (ceRNAs). In several studies, oncogenic lncRNAs such as HOTAIR, LINC00460, LINC00152, UCA1 and others—as well as circRNAs like circCCT3 and circ_0001823—have been shown to “sponge” miR‑613, thereby relieving its inhibition on downstream effectors and facilitating tumor progression. These ceRNA interactions regulate key cellular processes including cell cycle progression, apoptosis, epithelial–mesenchymal transition and metastatic dissemination across multiple tumor types."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "22", "end_ref": "37"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its canonical tumor‑suppressive functions, miR‑613 also affects therapeutic responses and metabolic as well as non‑cancerous pathological processes. For instance, in breast cancer, suppression of NAMPT by miR‑613 limits NAD biosynthesis and cell viability, whereas in hepatocellular and esophageal carcinomas, sponging of miR‑613 by MALAT1 or RMRP results in activation of oncogenic pathways. In addition, miR‑613 influences radiosensitivity in nasopharyngeal carcinoma via regulation of DNMT3B and TIMP3, and it plays roles in renal cell carcinoma and polycystic ovary syndrome by targeting regulators such as AXL and IGF‑1. These findings underscore the potential of miR‑613 not only as a prognostic biomarker but also as a promising target for therapeutic intervention across a spectrum of human diseases."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "38", "end_ref": "46"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Zhimin Ou, Taira Wada, Roberto Gramignoli, et al. 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| Synonyms | HSA-MIR-613, MIRN613 |
| NCBI Gene ID | 693198 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR613 has 229 functional associations with biological entities spanning 4 categories (molecular profile, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.
Click the + buttons to view associations for MIR613 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR613 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR613 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of MIR613 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR613 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR613 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR613 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MIR613 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GeneRIF Biological Term Annotations | biological terms co-occuring with MIR613 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of MIR613 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR613 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of MIR613 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |