| HGNC Family | Non-coding RNAs |
| Name | microRNA 889 |
| Description | microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nMicroRNA‐889 (miR‐889) is emerging as a multifaceted regulator with context‐dependent roles in tumorigenesis and cellular differentiation. In esophageal squamous cell carcinoma, for example, miR‐889 overexpression accelerates cell cycle progression and proliferation by directly targeting the tumor suppressor DAB2IP, indicating an oncogenic function."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Its aberrant expression has also been associated with colorectal cancer progression"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "and hepatocellular carcinoma prognosis"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ", thereby underscoring its potential utility as a diagnostic and prognostic biomarker.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its direct impact on cell proliferation, miR‐889 is deeply integrated into complex noncoding RNA networks that modulate tumor behavior. In cervical cancer, the long noncoding RNA XIST sequesters miR‐889‑3p to relieve repression of SIX1, while a circular RNA—hsa_circ_0009035—acts as a competing endogenous sponge for miR‐889‑3p to regulate HOXB7 expression; both mechanisms result in modulation of proliferation, migration, invasion, and radioresistance."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " In breast cancer, miR‐889‑3p targets Kruppel‐like factor 9 (KLF9), with its activity antagonized by lncRNA MBNL1‑AS1, leading to altered cell invasion, migration, and glycolysis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " Likewise, in osteosarcoma, circ_0078767 and circ_0002669 integrate miR‐889 into regulatory axes controlling the expression of KLF9 and MYCBP respectively, thereby influencing cell growth, migration, epithelial–mesenchymal transition, and apoptosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nConversely, tumor‐suppressive functions of miR‐889 have been observed in several malignancies. In non‐small cell lung cancer, enforced miR‐889 expression curtails proliferation and invasiveness through direct targeting of TAB1"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ", while in another lung cancer study, upregulation of miR‐889 restrains epithelial–mesenchymal transition and promotes apoptosis by targeting HIPK1."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " Moreover, in pancreatic ductal adenocarcinoma, exosomal lncRNA NNT‑AS1 modulates the miR‐889‑3p/HIF‑1α axis, leading to changes in glucose metabolism, proliferation, and metastatic potential."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": " Notably, miR‐889 also regulates the osteogenic differentiation of bone marrow mesenchymal stem cells, highlighting its broader biological relevance beyond oncogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yanting Xu, Jiangtu He, Yue Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "miR-889 promotes proliferation of esophageal squamous cell carcinomas through DAB2IP."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FEBS Lett (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.febslet.2015.03.027"}], "href": "https://doi.org/10.1016/j.febslet.2015.03.027"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25841337"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25841337"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Y Xiao, Z-H Li, Y-H Bi "}, {"type": "b", "children": [{"type": "t", "text": "MicroRNA-889 promotes cell proliferation in colorectal cancer by targeting DAB2IP."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_201904_17695"}], "href": "https://doi.org/10.26355/eurrev_201904_17695"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31081086"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31081086"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "He Wang, Huiwen Wang, Wenyu Cui, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Enhanced expression of miR-889 forecasts an unfavorable prognosis and facilitates cell progression in hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Diagn Pathol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13000-021-01111-5"}], "href": "https://doi.org/10.1186/s13000-021-01111-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34116691"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34116691"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xiaojuan Liu, Shuangshuang Xie, Jing Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long Noncoding RNA XIST Contributes to Cervical Cancer Development Through Targeting miR-889-3p/SIX1 Axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Biother Radiopharm (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1089/cbr.2019.3318"}], "href": "https://doi.org/10.1089/cbr.2019.3318"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32191528"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32191528"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Xia Zhao, Weilei Dong, Guifang Luo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Silencing of hsa_circ_0009035 Suppresses Cervical Cancer Progression and Enhances Radiosensitivity through MicroRNA 889-3p-Dependent Regulation of HOXB7."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/MCB.00631-20"}], "href": "https://doi.org/10.1128/MCB.00631-20"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33782039"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33782039"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Yongmei Jin, Lingli Xu, Bin Zhao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tumour-suppressing functions of the lncRNA MBNL1-AS1/miR-889-3p/KLF9 axis in human breast cancer cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Cycle (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/15384101.2022.2034254"}], "href": "https://doi.org/10.1080/15384101.2022.2034254"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35112997"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35112997"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Qiu Chen, Haishen Zhou, Weihao Rong "}, {"type": "b", "children": [{"type": "t", "text": "Circular RNA_0078767 upregulates Kruppel-like factor 9 expression by targeting microRNA-889, thereby inhibiting the progression of osteosarcoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bioengineered (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/21655979.2022.2084257"}], "href": "https://doi.org/10.1080/21655979.2022.2084257"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35758280"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35758280"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Ying Zhang, Yizhou Zhan, Zhaoyong Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Circ_0002669 promotes osteosarcoma tumorigenesis through directly binding to MYCBP and sponging miR-889-3p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biol Direct (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13062-024-00466-1"}], "href": "https://doi.org/10.1186/s13062-024-00466-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38570856"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38570856"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Zheng Dong, Bingchun Li, Xiaojuan Wang "}, {"type": "b", "children": [{"type": "t", "text": "ΜicroRNA‑889 plays a suppressive role in cell proliferation and invasion by directly targeting TAB1 in non‑small cell lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2019.10245"}], "href": "https://doi.org/10.3892/mmr.2019.10245"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31115539"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31115539"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Qiang Zhu, Yun Li, Lina Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MicroRNA-889-3p restrains the proliferation and epithelial-mesenchymal transformation of lung cancer cells via down-regulation of Homeodomain-interacting protein kinase 1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bioengineered (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/21655979.2021.2000283"}], "href": "https://doi.org/10.1080/21655979.2021.2000283"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34723781"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34723781"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Pingping Zhang, Qun Wang, Weijun Lu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "NNT-AS1 in CAFs-derived exosomes promotes progression and glucose metabolism through miR-889-3p/HIF-1α in pancreatic adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-024-57769-6"}], "href": "https://doi.org/10.1038/s41598-024-57769-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38521881"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38521881"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Gang Xu, Zheng Ding, Hui-Feng Shi "}, {"type": "b", "children": [{"type": "t", "text": "The mechanism of miR-889 regulates osteogenesis in human bone marrow mesenchymal stem cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Orthop Surg Res (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13018-019-1399-z"}], "href": "https://doi.org/10.1186/s13018-019-1399-z"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31727100"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31727100"}]}]}]}
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| Synonyms | MIR-889, MIRN889, HSA-MIR-889 |
| NCBI Gene ID | 100126345 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MIR889 has 215 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.
Click the + buttons to view associations for MIR889 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR889 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR889 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR889 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MIR889 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MIR889 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of MIR889 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of MIR889 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MIR889 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of MIR889 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MIR889 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |