MTNAP1 Gene

Name mitochondrial nucleoid associated protein 1
Description Predicted to be involved in cell population proliferation; mitochondrial DNA metabolic process; and positive regulation of mitochondrial DNA replication. Located in mitochondrial nucleoid. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nMitochondrial DNA (mtDNA) is organized into nucleoid structures that are essential for the organelle’s energy production and overall cellular metabolism. Uncharacterized proteins that associate with these nucleoids are of great interest, as they may provide novel insights into mitochondrial maintenance and function. Recent proximity labeling and imaging studies have identified MTNAP1 (formerly known as C17orf80) as a mitochondrial membrane-associated protein that localizes near the nucleoid, suggesting it plays a role in the structural organization of mtDNA within mitochondria."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurther analyses using immunofluorescence microscopy and proteomics have confirmed that MTNAP1 maintains a close association with mitochondrial nucleoids, even under conditions that inhibit mtDNA replication. Interestingly, although its nucleoid proximity and interactions imply a functional role in mtDNA dynamics, one study demonstrated that MTNAP1 is not essential for the basic processes of mtDNA maintenance and mitochondrial gene expression in cultured human cells."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn contrast, complementary findings highlight MTNAP1 as a bona fide mitochondrial nucleoid protein with robust double-stranded DNA binding activity across the mitochondrial genome. According to these results, MTNAP1 actively promotes mtDNA replication and helps sustain mtDNA homeostasis, thereby influencing mitochondrial metabolism and cell proliferation. These observations suggest that MTNAP1 could represent a promising therapeutic target for human diseases associated with defective mtDNA control."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Alisa Potter, Anu Hangas, Steffi Goffart, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Uncharacterized protein C17orf80 - a novel interactor of human mitochondrial nucleoids."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Sci (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/jcs.260822"}], "href": "https://doi.org/10.1242/jcs.260822"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37401363"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37401363"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Hao Wu, Wenshuo Zhang, Fengli Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "C17orf80 binds the mitochondrial genome to promote its replication."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.202302037"}], "href": "https://doi.org/10.1083/jcb.202302037"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37676315"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37676315"}]}]}]}
NCBI Gene ID 55028
API
Download Associations
Predicted Functions View MTNAP1's ARCHS4 Predicted Functions.
Co-expressed Genes View MTNAP1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View MTNAP1's ARCHS4 Predicted Functions.

Functional Associations

MTNAP1 has 718 functional associations with biological entities spanning 5 categories (chemical, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 15 datasets.

Click the + buttons to view associations for MTNAP1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of MTNAP1 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of MTNAP1 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of MTNAP1 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
GTEx eQTL 2025 SNPs regulating expression of MTNAP1 gene from the GTEx eQTL 2025 dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of MTNAP1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with MTNAP1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of MTNAP1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of MTNAP1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of MTNAP1 gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of MTNAP1 gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of MTNAP1 gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of MTNAP1 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of MTNAP1 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of MTNAP1 gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of MTNAP1 gene from the Sci-Plex Drug Perturbation Signatures dataset.